Factsheet for VIT_03s0038g03240.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
golgi 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	66.55	68.76
PGSC0003DMT400048017	Potato	golgi	63.01	68.44
GSMUA_Achr3P14740_001	Banana	mitochondrion	60.3	68.39
Solyc01g112070.2.1	Tomato	nucleus	62.33	68.08
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	49.83	66.59
CDY69289	Canola	cytosol	43.41	64.9
KRH74090	Soybean	endoplasmic reticulum, golgi, plasma membrane	60.47	64.16
KRH14026	Soybean	golgi	60.81	63.49
Os04t0563000-01	Rice	endoplasmic reticulum, golgi	59.12	63.41
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	58.95	63.34
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	63.34	61.68
TraesCS2D01G401900.1	Wheat	golgi	59.29	61.26
TraesCS2B01G423100.1	Wheat	golgi	58.95	61.01
CDY54803	Canola	golgi	56.59	60.69
CDY64279	Canola	golgi	56.59	60.69
Bra033562.1-P	Field mustard	golgi	56.25	60.44
PGSC0003DMT400043331	Potato	extracellular	55.07	60.15
KXG26900	Sorghum	golgi	58.45	59.76
Zm00001d002668_P004	Maize	golgi	58.45	59.45
EES15207	Sorghum	golgi	58.11	59.41
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	57.94	59.14
Zm00001d050483_P002	Maize	golgi	57.6	58.89
Os08t0554050-01	Rice	golgi	58.95	58.46
TraesCS5B01G348700.1	Wheat	golgi	56.93	58.1
TraesCS5D01G353700.1	Wheat	golgi	56.08	57.24
TraesCS7D01G276100.1	Wheat	golgi	57.94	57.17
TraesCS7A01G276200.2	Wheat	golgi	58.11	57.14
HORVU5Hr1G086560.1	Barley	golgi	55.74	56.99
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	57.26	56.97
Zm00001d021448_P002	Maize	mitochondrion	57.09	56.9
TraesCS7B01G174000.1	Wheat	golgi	57.94	56.79
TraesCS5A01G347600.2	Wheat	golgi	56.08	56.66
TraesCS2A01G405000.3	Wheat	golgi	59.46	56.23
Solyc10g074490.1.1	Tomato	golgi	60.14	55.19
HORVU7Hr1G058080.1	Barley	plastid	58.45	53.31
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	50.68	52.45
VIT_04s0044g01200.t01	Wine grape	endoplasmic reticulum, golgi	31.25	37.07
VIT_13s0019g03250.t01	Wine grape	cytosol	28.55	36.98
VIT_17s0000g04810.t01	Wine grape	golgi	29.9	34.44
VIT_14s0083g00940.t01	Wine grape	cytosol, vacuole	30.24	34.42
VIT_18s0001g06390.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	31.08	34.33
VIT_08s0007g01650.t01	Wine grape	plastid	30.41	29.13
VIT_11s0016g01190.t01	Wine grape	cytosol, plastid	29.73	27.76

Protein Annotations

EntrezGene:100247016	wikigene:100247016	Gene3D:3.40.50.11350	MapMan:35.1	ProteinID:CCB60573	ProteinID:CCB60573.1
UniProt:F6I0V7	EMBL:FN596508	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	EntrezGene:LOC100247016	wikigene:LOC100247016	PFAM:PF10250
PIRSF:PIRSF009360	PANTHER:PTHR31818	PANTHER:PTHR31818:SF0	TIGR:TC71124	TMHMM:TMhelix	UniParc:UPI00021094BC
ArrayExpress:VIT_03s0038g03240	EnsemblPlantsGene:VIT_03s0038g03240	EnsemblPlants:VIT_03s0038g03240.t01	unigene:Vvi.16811	RefSeq:XP_002278795	RefSeq:XP_002278795.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:2374641..2379937

Molecular Weight (calculated)

66762.3 Da

IEP (calculated)

9.921

GRAVY (calculated)

-0.434

Length

592 amino acids

Sequence
(BLAST)

001: MKKKNREAAS GLRLLLLRRR RLQSRLRLLA PVVSAVSGVI LLLFALFTFL APAPISRNEL LFRRNSSLSS GLEAQSSADR DVVFRVPATG GSLGNDMWTS
101: RLSKFYYGCS NASVKFSKVG VSTQRNRYLL IATSGGLNQQ RTGITDAVVA ARILNATLVV PKLDQKSFWK DSSNFAEIFD ADWFISFLSK DVKIIKQLPK
201: EGRKIMAPYT MRVPRKCTPS CYQKRVLPVL TKKHAVQLTK FDYRLSNRLD MDLQKLRCRV NYHALKFTNS ILEMGKKLVE RMRMKSKHFI ALHLRFEPDM
301: LAFSGCYYGG GEKERTELGA LRKRWKTLHI RNPDKERRQG KCPLTPEEVG LMLRALGFGS DVHIYVASGE VYGGETTLAP LKALFPNFHS KDTIASEEEL
401: APFSSFSSRM AALDFIVCDE SDVFVTNNNG NMARMLAGRR RYFGHKPTIR PNAKKLYRLF MNRNNMTWEE FASGVRSRQI GFMGEPNEVR PGRGEFHENP
501: SSCICELPEA KARGDLGSKV QANVGTEDLS TGKDSEQADE QPTEDEHDWI DMDYSENENG LQGKGSLNLT DSDLGGLLKA DPQPELEEMF SD

Best Arabidopsis Sequence Match ( AT1G76270.1 )
(BLAST)

001: MNFHRRRYPY YNRLRRLLPL VIAVSLSLLI LFAFLSFLAP PPGDSDRLPP RVRYSSNDAI KATGFHIPRA GGRSDRDIWR SRNAEFFFGC SNASSKFANS
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD

Arabidopsis Description

OFUT16O-fucosyltransferase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q949U4]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.