Factsheet for VIT_11s0016g01190.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02613	Soybean	nucleus	74.61	75.32
KRH19306	Soybean	nucleus, plastid	73.82	74.76
KRH12531	Soybean	plastid	67.98	72.19
Solyc07g041750.2.1	Tomato	plastid	72.24	70.9
AT5G35570.1	Thale cress	cytosol, plastid	71.92	69.94
CDX74650	Canola	nucleus, plastid	69.09	68.54
Bra035396.1-P	Field mustard	nucleus, plastid	68.93	68.39
CDY33687	Canola	nucleus, plastid	69.24	68.27
GSMUA_Achr9P16090_001	Banana	nucleus, peroxisome, plasma membrane	61.36	63.98
TraesCS5D01G215300.3	Wheat	nucleus, plasma membrane, plastid	62.46	62.96
TraesCS5A01G209100.1	Wheat	plastid	61.99	62.09
TraesCS5B01G207300.2	Wheat	cytosol, plasma membrane, plastid	61.83	62.03
EER96805	Sorghum	plastid	63.09	61.73
HORVU5Hr1G061540.6	Barley	nucleus, plasma membrane, plastid	61.99	61.7
Os09t0442900-01	Rice	cytosol, plasma membrane, plastid	61.04	60.66
VIT_13s0019g03250.t01	Wine grape	cytosol	41.8	57.99
VIT_08s0007g01650.t01	Wine grape	plastid	47.16	48.38
Zm00001d020643_P002	Maize	plasma membrane, plastid	54.89	45.25
VIT_04s0044g01200.t01	Wine grape	endoplasmic reticulum, golgi	32.33	41.08
VIT_14s0083g00940.t01	Wine grape	cytosol, vacuole	33.44	40.77
VIT_17s0000g04810.t01	Wine grape	golgi	32.65	40.27
VIT_18s0001g06390.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	32.49	38.43
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	28.71	31.82
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	28.55	31.59
VIT_03s0038g03240.t01	Wine grape	mitochondrion	27.76	29.73

Protein Annotations

EntrezGene:100251000	wikigene:100251000	Gene3D:3.40.50.11350	MapMan:35.1	ProteinID:CBI27816	ProteinID:CBI27816.3
UniProt:D7TCF8	EMBL:FN595756	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	EntrezGene:LOC100251000	wikigene:LOC100251000	PFAM:PF10250
PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF8	TIGR:TC59732	TMHMM:TMhelix	UniParc:UPI00019842E4
ArrayExpress:VIT_11s0016g01190	EnsemblPlantsGene:VIT_11s0016g01190	EnsemblPlants:VIT_11s0016g01190.t01	unigene:Vvi.15060	RefSeq:XP_002279041	RefSeq:XP_002279041.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:949389..955298

Molecular Weight (calculated)

71531.2 Da

IEP (calculated)

8.761

GRAVY (calculated)

-0.505

Length

634 amino acids

Sequence
(BLAST)

001: MGFHHNASDG VSQRVNSPRF SGPMTRRAHS FKRGNSSGNA HNNGSSKGGG GFDPHYEIDV HLNSPRSEIC GSPVSGDGFD VVLERKQTHH VNQRVHGGVL
101: KNQPKKHVGS AVLDLGLRER KKLGHWMFFV FCGVCLFLGV LKICATGWFG SAIDRIGSHQ DFSDPLNTHL NEMDKSSHDY VYREGGSDVE RTLMMVASGV
201: VNRQKSMAEN SDIWSKPNSE NFTQCVNQPR IHKKLDAKTN GYIIINANGG LNQMRFGICD MVAIAKVMKA TLVLPSLDHT SYWADDSDFK DLFDWQHFIK
301: ALKDDVHIVE TLPPDYAGIE PFTKTPISWS KVSYYKTEIL PLLKQYKVIY FTHTDSRLAN NGIPSSIQKL RCRVNYKALK YSSLIEELGN TLVSRMREGG
401: NPYIALHLRY EKDMLSFTGC SHNLTAAEDE ELRTMRYEVS HWKEKEINGT ERRLLGGCPL TPRETSLLLK GLGFPSSTRI YLVAGEAYGK GSMQYLMNDF
501: PNIFSHSTLS TEEELSPFKD HQNRLAGLDY VVALQSDVFV YTYDGNMAKA VQGHRRFENF KKTISPEKMN FVKLVDDLDE GKITWKKFSS KVKKLHKDRA
601: GAPYLREPGE FPKLEESFYA NPLPGCICET TPQK

Best Arabidopsis Sequence Match ( AT5G35570.1 )
(BLAST)

001: MGHHHDGGDG VPQHHVNSPR FSGPMTRRAQ SFKRGGSAGS SSNNNNTHVG VSGGDGNNNN NTSSTLRVHH EIDLPLNSPR SEIVSGSSGS DPSGGFDSAL
101: NRKHQTYGQL RERVVKGLLR KPMGSVVSDF SLRERKKLGH WMFFAFCGVC LFLGVFKICA TGWLGSAIDG AASDQDLSIP RVNLLDHSSH DYIYKDGGND
201: VDPTLVMVAS DVVGDQNSVV EFSGVWAKPE SGNFSRCIDS SRSRKKLGAN TNGYLLINAN GGLNQMRFGI CDMVAVAKIM KATLVLPSLD HSSYWADDSG
301: FKDLFDWQHF IEELKDDIHI VEMLPSELAG IEPFVKTPIS WSKVGYYKKE VLPLLKQHIV MYLTHTDSRL ANNDLPDSVQ KLRCRVNYRA LKYSAPIEEL
401: GNVLVSRMRQ DRGPYLALHL RYEKDMLAFT GCSHSLTAEE DEELRQMRYE VSHWKEKEIN GTERRLQGGC PLTPRETSLL LRALEFPSSS RIYLVAGEAY
501: GNGSMDPLNT DFPNIFSHSI LATKEELSPF NNHQNMLAGL DYIVALQSEV FLYTYDGNMA KAVQGHRRFE DFKKTINPDK MNFVKLVDAL DEGRISWKKF
601: SSKVKKLHKD RNGAPYNRES GEFPKLEESF YANPLPGCIC ENTEEEGLMR RT

Arabidopsis Description

OFUT35O-fucosyltransferase 35 [Source:UniProtKB/Swiss-Prot;Acc:Q94BY4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.