Factsheet for TraesCS5D01G215300.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plasma membrane, plastid

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane, plastid
Any Predictor:	nucleus, plasma membrane, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G207300.2	Wheat	cytosol, plasma membrane, plastid	97.46	96.99
TraesCS5A01G209100.1	Wheat	plastid	97.46	96.84
HORVU5Hr1G061540.6	Barley	nucleus, plasma membrane, plastid	96.82	95.6
EER96805	Sorghum	plastid	85.21	82.72
Os09t0442900-01	Rice	cytosol, plasma membrane, plastid	83.78	82.6
GSMUA_Achr9P16090_001	Banana	nucleus, peroxisome, plasma membrane	61.37	63.49
KRH12531	Soybean	plastid	59.46	62.65
VIT_11s0016g01190.t01	Wine grape	cytosol, plastid	62.96	62.46
KRH02613	Soybean	nucleus	61.21	61.31
Zm00001d020643_P002	Maize	plasma membrane, plastid	74.56	60.99
KRH19306	Soybean	nucleus, plastid	60.41	60.7
AT5G35570.1	Thale cress	cytosol, plastid	62.64	60.43
CDX74650	Canola	nucleus, plastid	60.25	59.31
CDY33687	Canola	nucleus, plastid	60.57	59.25
Bra035396.1-P	Field mustard	nucleus, plastid	60.1	59.15
Solyc07g041750.2.1	Tomato	plastid	59.46	57.89
TraesCS3D01G358900.2	Wheat	plastid	40.54	46.2
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	31.64	42.25
TraesCS1D01G279000.1	Wheat	plastid	37.84	41.75
TraesCS2D01G352800.1	Wheat	mitochondrion	32.11	41.39
TraesCS6D01G268600.1	Wheat	mitochondrion	32.75	41.37
TraesCS7D01G215200.1	Wheat	mitochondrion, plastid	32.75	41.28
TraesCS4D01G175500.2	Wheat	mitochondrion, plastid	32.43	40.96
TraesCS5D01G259500.1	Wheat	golgi	32.43	40.56
TraesCS3D01G095400.1	Wheat	mitochondrion	31.0	39.8
TraesCS7D01G178800.1	Wheat	golgi	32.59	38.83
TraesCS2D01G410600.1	Wheat	plastid	26.71	33.2
TraesCS5D01G353700.1	Wheat	golgi	27.03	29.31
TraesCS2D01G401900.1	Wheat	golgi	26.39	28.97
TraesCS7D01G276100.1	Wheat	golgi	27.34	28.67
TraesCS2D01G316700.1	Wheat	nucleus, plastid	5.25	24.81
TraesCS7D01G061500.1	Wheat	nucleus, plastid	5.25	24.26
TraesCS7D01G061900.1	Wheat	nucleus, plastid	5.25	24.26
TraesCS7D01G158900.1	Wheat	nucleus, plastid	5.25	24.26
TraesCS7D01G159300.1	Wheat	nucleus, plastid	5.25	24.26
TraesCS7D01G432000.1	Wheat	nucleus, plastid	5.25	24.26

Protein Annotations

Gene3D:3.40.50.11350	MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0009507	GO:GO:0009536	PFAM:PF10250
PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF8	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G215300	EnsemblPlants:TraesCS5D01G215300.3
TIGR:cd11299	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:324592994..324597913

Molecular Weight (calculated)

70073.2 Da

IEP (calculated)

7.665

GRAVY (calculated)

-0.480

Length

629 amino acids

Sequence
(BLAST)

001: MGYQPKHGGG ASGAAGGGGG GAGAGAGDHL PRLHSPRVAG GGYMTRRANS FKRCPGGEIE LQISGSPRSP RTDGLGSPPK DAAEASPGGL HHHQQLRFRL
101: FKRPGAGGGA GYVVLGLGIR ERRKLGNLLF FAFCGVCLLL GVVKIWAGGR SALPAGDDLQ DLSASFSSDK GHQVNHFGYM GGKESDRMLM TVESSIAERQ
201: SSVAEASGIW SQPSSENFRQ CIVSNSHKKQ DSRSNGYILI NANGGLNQMR FGICDMVAVA KILKATLVLP SLDHTSYWAD DSEFKDLFNW RHFIESLKED
301: IDIVETLPPA YKHIEPLAKA PISWSKVNYY RDEILPLLKK HRVIYFTHTD SRLANNDLPS YIQKLRCRVN YRSLKYSHTI EDLGATLVSR MRQDGSPYLA
401: LHLRYEKDML AFTGCSHGLT SDEEEELRKM RYEVSHWKEK DINGTERRSI GGCPLTPRET SLLLKGLGFT RNTRIYLVAG EAFGNGSMQA LLDDFPYIYS
501: HSTLATEEEL EPFKNHQNML AGLDYIVALQ SDVFMYTYDG NMAKAVQGHR RFEDFRKTIN PDRMDFVNLV DEFDEGRIPW EEFSSEVKRL HKDRTGAPYF
601: REPGEFPKLE ESFFANPLPG CICEKHSEQ

Best Arabidopsis Sequence Match ( AT5G35570.1 )
(BLAST)

001: MGHHHDGGDG VPQHHVNSPR FSGPMTRRAQ SFKRGGSAGS SSNNNNTHVG VSGGDGNNNN NTSSTLRVHH EIDLPLNSPR SEIVSGSSGS DPSGGFDSAL
101: NRKHQTYGQL RERVVKGLLR KPMGSVVSDF SLRERKKLGH WMFFAFCGVC LFLGVFKICA TGWLGSAIDG AASDQDLSIP RVNLLDHSSH DYIYKDGGND
201: VDPTLVMVAS DVVGDQNSVV EFSGVWAKPE SGNFSRCIDS SRSRKKLGAN TNGYLLINAN GGLNQMRFGI CDMVAVAKIM KATLVLPSLD HSSYWADDSG
301: FKDLFDWQHF IEELKDDIHI VEMLPSELAG IEPFVKTPIS WSKVGYYKKE VLPLLKQHIV MYLTHTDSRL ANNDLPDSVQ KLRCRVNYRA LKYSAPIEEL
401: GNVLVSRMRQ DRGPYLALHL RYEKDMLAFT GCSHSLTAEE DEELRQMRYE VSHWKEKEIN GTERRLQGGC PLTPRETSLL LRALEFPSSS RIYLVAGEAY
501: GNGSMDPLNT DFPNIFSHSI LATKEELSPF NNHQNMLAGL DYIVALQSEV FLYTYDGNMA KAVQGHRRFE DFKKTINPDK MNFVKLVDAL DEGRISWKKF
601: SSKVKKLHKD RNGAPYNRES GEFPKLEESF YANPLPGCIC ENTEEEGLMR RT

Arabidopsis Description

OFUT35O-fucosyltransferase 35 [Source:UniProtKB/Swiss-Prot;Acc:Q94BY4]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.