Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G432000.1 | Wheat | nucleus, plastid | 100.0 | 97.79 |
| TraesCS7D01G159300.1 | Wheat | nucleus, plastid | 100.0 | 97.79 |
| TraesCS7D01G158900.1 | Wheat | nucleus, plastid | 100.0 | 97.79 |
| TraesCS7D01G061900.1 | Wheat | nucleus, plastid | 100.0 | 97.79 |
| TraesCS7D01G061500.1 | Wheat | nucleus, plastid | 100.0 | 97.79 |
| CDX85906 | Canola | nucleus, plastid | 100.0 | 97.79 |
| TraesCS2D01G352800.1 | Wheat | mitochondrion | 29.32 | 7.99 |
| TraesCS4D01G284800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 26.32 | 7.43 |
| TraesCS4D01G175500.2 | Wheat | mitochondrion, plastid | 26.32 | 7.03 |
| TraesCS5D01G259500.1 | Wheat | golgi | 26.32 | 6.96 |
| TraesCS3D01G095400.1 | Wheat | mitochondrion | 25.56 | 6.94 |
| TraesCS6D01G268600.1 | Wheat | mitochondrion | 25.56 | 6.83 |
| TraesCS7D01G178800.1 | Wheat | golgi | 27.07 | 6.82 |
| TraesCS7D01G215200.1 | Wheat | mitochondrion, plastid | 25.56 | 6.81 |
| TraesCS3D01G358900.2 | Wheat | plastid | 24.81 | 5.98 |
| TraesCS1D01G279000.1 | Wheat | plastid | 25.56 | 5.96 |
| TraesCS2D01G410600.1 | Wheat | plastid | 21.05 | 5.53 |
| TraesCS5D01G215300.3 | Wheat | nucleus, plasma membrane, plastid | 24.81 | 5.25 |
| TraesCS2D01G401900.1 | Wheat | golgi | 22.56 | 5.24 |
| TraesCS7D01G276100.1 | Wheat | golgi | 22.56 | 5.0 |
| TraesCS5D01G353700.1 | Wheat | golgi | 20.3 | 4.66 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.4 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0046982 |
| InterPro:Histone-fold | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H3/CENP-A | InterPro:IPR009072 | PFAM:PF00125 | PRINTS:PR00622 |
| ScanProsite:PS00322 | ScanProsite:PS00959 | PANTHER:PTHR11426 | PANTHER:PTHR11426:SF163 | SMART:SM00428 | SUPFAM:SSF47113 |
| EnsemblPlantsGene:TraesCS2D01G316700 | EnsemblPlants:TraesCS2D01G316700.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:406140713..406141509
Molecular Weight (calculated)
15106.6 Da
IEP (calculated)
11.726
GRAVY (calculated)
-0.595
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MARTKQTARK STGGKAPRKQ LAARKSAPTT GGVKKPHRYR PGTVALREIR KYQKSTELLI RKLPFQRLVR EIAQDFKTDL RFQSHAVLAL QEAAEAYLVG
101: LFEDTNLCAI HAKRVTIMPK DIQLARRIRG ERA
101: LFEDTNLCAI HAKRVTIMPK DIQLARRIRG ERA
001: MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTE LLIRKLPFQR LVREIAQDFK TDLRFQSHAV LALQEAAEAY
101: LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA
101: LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA
Arabidopsis Description
Histone superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRL0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.