CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
golgi 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G215300.3	Wheat	nucleus, plasma membrane, plastid	82.72	85.21
TraesCS5A01G209100.1	Wheat	plastid	82.56	84.52
TraesCS5B01G207300.2	Wheat	cytosol, plasma membrane, plastid	82.41	84.49
Os09t0442900-01	Rice	cytosol, plasma membrane, plastid	83.18	84.48
HORVU5Hr1G061540.6	Barley	nucleus, plasma membrane, plastid	82.72	84.14
Zm00001d020643_P002	Maize	plasma membrane, plastid	82.41	69.44
KRH12531	Soybean	plastid	58.95	63.99
VIT_11s0016g01190.t01	Wine grape	cytosol, plastid	61.73	63.09
KRH02613	Soybean	nucleus	60.8	62.74
KRH19306	Soybean	nucleus, plastid	60.03	62.14
GSMUA_Achr9P16090_001	Banana	nucleus, peroxisome, plasma membrane	58.18	62.01
AT5G35570.1	Thale cress	cytosol, plastid	60.8	60.43
CDY33687	Canola	nucleus, plastid	59.57	60.03
Bra035396.1-P	Field mustard	nucleus, plastid	59.1	59.94
CDX74650	Canola	nucleus, plastid	59.1	59.94
Solyc07g041750.2.1	Tomato	plastid	58.49	58.67
OQU87869	Sorghum	mitochondrion	37.81	52.24
EER92792	Sorghum	endoplasmic reticulum, golgi	30.86	43.67
EES15789	Sorghum	mitochondrion	32.72	43.27
EER92325	Sorghum	mitochondrion	32.72	42.4
KXG22127	Sorghum	plastid	39.97	42.39
EER99050	Sorghum	golgi, mitochondrion, plastid	31.48	40.96
KXG31767	Sorghum	mitochondrion	30.56	40.16
EER89610	Sorghum	plastid	31.79	40.16
OQU85485	Sorghum	mitochondrion	30.25	39.28
OQU76069	Sorghum	mitochondrion	31.17	37.55
EES12618	Sorghum	plastid	25.93	33.6
EES15207	Sorghum	golgi	26.39	29.53
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	26.7	29.08
KXG26900	Sorghum	golgi	25.93	29.02
KXG26432	Sorghum	nucleus, plastid	4.94	23.53

Protein Annotations

Gene3D:3.40.50.11350	MapMan:35.1	EntrezGene:8081006	UniProt:C5XDR8	EnsemblPlants:EER96805	ProteinID:EER96805
ProteinID:EER96805.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006004
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF8
EnsemblPlantsGene:SORBI_3002G217700	unigene:Sbi.4772	TMHMM:TMhelix	UniParc:UPI0001A83531	RefSeq:XP_002460284.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:60988531..60994239

Molecular Weight (calculated)

72447.7 Da

IEP (calculated)

7.027

GRAVY (calculated)

-0.529

Length

648 amino acids

Sequence
(BLAST)

001: MGYQPMHGNG GTAGAGTSGS GGGGGGGGGD HLHHHHQRLH SPRMAAGGGS MTRRASSFKR GASGEIELQI GSPRSPRCDG LGSPPSDSVE PSGGGLLHHH
101: HHQGQQNQHL RFRLFKPPVG SGGSAVEVGL GLGIRERRKL GNMLFLAFCC VCLLLGVAKI LAGGWFALPG NDKDADLKDL SVSFSGEKVH QVDHHFVYMG
201: GKESDRTLMT LESNIDGRED TVAEASDVWS QPNSTNFRQC IVSNSHKKQD SHTNGYIIIN ANGGLNQMRF GICDMVAVAK ILKATLVLPS LDHTSYWGDD
301: SEFKDLFNWR HFIESLKEDI DIVETLPPEY SDIEPLAKAP ISWSKVHYYR DEILPLLKKH KVIYFTHTDS RLANNGLPSY IQKLRCRVNY RSLKYSHTIE
401: DLGNTLVSRM RQDGSPYLAL HLRYEKDMLA FTGCSHNLTS EEEEELRKMR YEVSHWKEKE INATERRSLG GCPLTPRETS FLLKGLGFTR NTRIYLVAGE
501: TFGNGSMNAL KDDFPNIYSH STLATEEELA PFKNHQNMLA GLDYIVALQS DVFMYTYDGN MAKAVQGHRR FENFRKTINP DRMSFVNLID EFDEGRVPWD
601: TFSSEVKRLH KDRIGAPYFR EPGEFPKLEE SFFANPLPDC ICEKHSEE

Best Arabidopsis Sequence Match ( AT5G35570.1 )
(BLAST)

001: MGHHHDGGDG VPQHHVNSPR FSGPMTRRAQ SFKRGGSAGS SSNNNNTHVG VSGGDGNNNN NTSSTLRVHH EIDLPLNSPR SEIVSGSSGS DPSGGFDSAL
101: NRKHQTYGQL RERVVKGLLR KPMGSVVSDF SLRERKKLGH WMFFAFCGVC LFLGVFKICA TGWLGSAIDG AASDQDLSIP RVNLLDHSSH DYIYKDGGND
201: VDPTLVMVAS DVVGDQNSVV EFSGVWAKPE SGNFSRCIDS SRSRKKLGAN TNGYLLINAN GGLNQMRFGI CDMVAVAKIM KATLVLPSLD HSSYWADDSG
301: FKDLFDWQHF IEELKDDIHI VEMLPSELAG IEPFVKTPIS WSKVGYYKKE VLPLLKQHIV MYLTHTDSRL ANNDLPDSVQ KLRCRVNYRA LKYSAPIEEL
401: GNVLVSRMRQ DRGPYLALHL RYEKDMLAFT GCSHSLTAEE DEELRQMRYE VSHWKEKEIN GTERRLQGGC PLTPRETSLL LRALEFPSSS RIYLVAGEAY
501: GNGSMDPLNT DFPNIFSHSI LATKEELSPF NNHQNMLAGL DYIVALQSEV FLYTYDGNMA KAVQGHRRFE DFKKTINPDK MNFVKLVDAL DEGRISWKKF
601: SSKVKKLHKD RNGAPYNRES GEFPKLEESF YANPLPGCIC ENTEEEGLMR RT

Arabidopsis Description

OFUT35O-fucosyltransferase 35 [Source:UniProtKB/Swiss-Prot;Acc:Q94BY4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.