Factsheet for VIT_04s0044g01200.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
mitochondrion 2
endoplasmic reticulum 3
golgi 4
extracellular 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53889	Soybean	mitochondrion, plastid	74.55	72.94
Solyc11g005870.1.1	Tomato	mitochondrion	71.74	72.62
KRH64055	Soybean	golgi, mitochondrion	73.55	72.1
GSMUA_Achr10P...	Banana	golgi, mitochondrion, vacuole	68.34	69.73
Bra037783.1-P	Field mustard	mitochondrion	69.14	67.91
CDX81230	Canola	mitochondrion	68.94	67.58
CDY18704	Canola	mitochondrion	69.14	67.51
AT5G64600.1	Thale cress	mitochondrion	69.94	66.86
EES15789	Sorghum	mitochondrion	63.73	64.9
Os12t0190100-01	Rice	golgi, mitochondrion, plasma membrane	63.73	64.24
Zm00001d041823_P003	Maize	mitochondrion, vacuole	62.73	64.01
HORVU2Hr1G086020.2	Barley	mitochondrion	62.32	63.73
TraesCS2D01G352800.1	Wheat	mitochondrion	62.12	63.52
TraesCS2A01G355500.1	Wheat	mitochondrion	61.72	63.11
TraesCS2B01G372800.1	Wheat	mitochondrion	61.72	63.11
VIT_18s0001g06390.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	55.51	51.68
VIT_13s0019g03250.t01	Wine grape	cytosol	41.08	44.86
VIT_17s0000g04810.t01	Wine grape	golgi	39.68	38.52
VIT_14s0083g00940.t01	Wine grape	cytosol, vacuole	39.48	37.88
VIT_08s0007g01650.t01	Wine grape	plastid	42.48	34.3
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	37.47	32.64
VIT_11s0016g01190.t01	Wine grape	cytosol, plastid	41.08	32.33
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	35.87	31.29
VIT_03s0038g03240.t01	Wine grape	mitochondrion	37.07	31.25

Protein Annotations

EntrezGene:100242141	MapMan:35.1	ProteinID:CBI37547	ProteinID:CBI37547.3	UniProt:D7U4F0	EMBL:FN596506
InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	PFAM:PF10250	PIRSF:PIRSF009360
PANTHER:PTHR31741	PANTHER:PTHR31741:SF15	TMHMM:TMhelix	UniParc:UPI0001BE47A4	ArrayExpress:VIT_04s0044g01200	EnsemblPlantsGene:VIT_04s0044g01200
EnsemblPlants:VIT_04s0044g01200.t01	RefSeq:XP_010649380.1	:	:	:	:

Description

No Description!

Coordinates

chr4:-:22605239..22630739

Molecular Weight (calculated)

57213.8 Da

IEP (calculated)

9.792

GRAVY (calculated)

-0.434

Length

499 amino acids

Sequence
(BLAST)

001: MVNSRGYSHS RASSTSKFLP RKPTLYTITV YIILLFAFSI VIFLFYTRDV LEDEQKPLSS EDSQFVQMQD ELWNAPSSHG LHPCVKPTSK YKATQGWDRY
101: MTVKSNGGLN QMRTGISDMV AVARIMNATL VIPQLDRRSF WKDSSTFADI FDELHFMTTL QGDVRIVKEL PRQLESVPRA RKHFTSWSSM GYYQEMTHLW
201: EEYQVIHVAK SDSRLANNDL PIDIQRLRCR ALYHALRFSP QIENLGKKLV ERLRSRGRRY IALHLRYEKD MLSFTGCTYG LTDAESEELR IMRENTNHWK
301: MKKINATEQR IGGFCPLTPK EIGIFLRALG YLPSTLIYIA AGEIYGGDAR LVELKSRFPN LIFKETIATQ EELKAFAHHS SQTAALDYII SIESDVFIPS
401: HSGNMARAVE GHRRFLGHGK TITPDRKGLV DIFDKLEAGQ LKEGSSLSYL VTQMHKNRQG APRKRGGSLP GVKGRARFRT EESFYENPYP ECICSSKKH

Best Arabidopsis Sequence Match ( AT5G64600.1 )
(BLAST)

001: MVKHRNSSRS IISYSSSIAR FFSRKAISLY LIFVFAFTIW VLVFSSRNIQ TDDDHTKHQQ QHHRDLIDSE SFPPPYLPPR KNLQKPYENT QLWTPPFSFG
101: LHPCVKPTPK YKEFSESDHY ITVKSNGGLN QMRTGIADIV AVAHIMNATL VIPELDKRSF WQDSSVFSDI FDEEQFIKSL RRDVKVIKKL PKEVESLPRA
201: RKHFTSWSSV GYYEEMTHLW KEYKVIHVAK SDSRLANNDL PIDVQRLRCR VLYRGLCFSP AIESLGQKLV ERLKSRAGRY IALHLRYEKD MLAFTGCTYG
301: LTDAESEELR VMRESTSHWK IKSINSTEQR EEGLCPLTPK EVGIFLKGLG YSQSTVIYIA AGEIYGGDDR LSELKSRFPN LVFKETLAGN EELKGFTGHA
401: TKTAALDYII SVESDVFVPS HSGNMARAVE GHRRFLGHRR TITPDRKGLV KLFVKMERGQ LKEGPKLSNF VNQMHKDRQG APRRRKGPTQ GIKGRARFRT
501: EEAFYENPYP ECICSSKEHK EP

Arabidopsis Description

OFUT38O-fucosyltransferase 38 [Source:UniProtKB/Swiss-Prot;Acc:F4KF16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.