Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000223.1-P | Field mustard | vacuole | 99.64 | 73.98 |
| CDY22517 | Canola | vacuole | 98.18 | 72.9 |
| CDX79943 | Canola | vacuole | 91.61 | 68.02 |
| CDY23857 | Canola | vacuole | 91.61 | 68.02 |
| AT2G41300.1 | Thale cress | vacuole | 89.42 | 62.18 |
| CDX76030 | Canola | endoplasmic reticulum, golgi, vacuole | 70.8 | 51.6 |
| CDY30963 | Canola | vacuole | 70.44 | 51.33 |
| CDX76033 | Canola | vacuole | 70.44 | 51.33 |
| CDY30962 | Canola | vacuole | 69.71 | 50.8 |
| CDX77108 | Canola | vacuole | 67.15 | 49.73 |
| CDY30558 | Canola | vacuole | 67.15 | 49.33 |
| CDY30959 | Canola | extracellular, golgi, vacuole | 65.69 | 48.65 |
| CDY54042 | Canola | vacuole | 64.6 | 47.84 |
| CDX67673 | Canola | vacuole | 63.87 | 47.3 |
| CDX72080 | Canola | endoplasmic reticulum, extracellular, golgi | 62.77 | 46.61 |
| CDY39351 | Canola | extracellular, plasma membrane, vacuole | 59.12 | 46.42 |
| CDY06144 | Canola | vacuole | 62.41 | 46.34 |
| CDY47397 | Canola | vacuole | 46.35 | 43.49 |
| CDX72079 | Canola | vacuole | 44.89 | 37.27 |
| KRH66809 | Soybean | endoplasmic reticulum | 49.27 | 36.39 |
| KRG95135 | Soybean | endoplasmic reticulum | 48.54 | 35.85 |
| CDY06143 | Canola | vacuole | 49.27 | 35.16 |
| CDX95058 | Canola | vacuole | 44.53 | 32.62 |
| CDX93560 | Canola | vacuole | 45.99 | 32.06 |
| CDX92388 | Canola | vacuole | 42.7 | 31.97 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 45.99 | 31.9 |
| CDY47728 | Canola | vacuole | 32.85 | 27.52 |
| CDX79944 | Canola | vacuole | 37.59 | 27.47 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 39.78 | 27.05 |
| CDY23858 | Canola | vacuole | 36.86 | 27.01 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 39.78 | 26.98 |
| CDY45861 | Canola | vacuole | 32.48 | 26.97 |
| CDY22515 | Canola | vacuole | 34.31 | 26.93 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 39.42 | 26.8 |
| CDX96506 | Canola | vacuole | 31.02 | 26.15 |
| CDY35420 | Canola | vacuole | 33.21 | 26.0 |
| CDX73038 | Canola | vacuole | 30.66 | 25.85 |
| CDX73039 | Canola | vacuole | 30.66 | 25.77 |
| CDX96507 | Canola | vacuole | 30.66 | 25.77 |
| CDY66188 | Canola | vacuole | 29.93 | 25.0 |
| CDX68204 | Canola | vacuole | 29.93 | 25.0 |
| CDY47729 | Canola | vacuole | 29.56 | 24.92 |
| CDY66189 | Canola | vacuole | 27.01 | 24.92 |
| CDX73037 | Canola | vacuole | 29.56 | 24.7 |
| CDY45863 | Canola | vacuole | 29.2 | 24.62 |
| CDX96505 | Canola | vacuole | 29.2 | 24.39 |
| CDY16307 | Canola | golgi, vacuole | 24.82 | 18.38 |
| CDY33280 | Canola | golgi, vacuole | 24.45 | 18.11 |
| CDY33279 | Canola | golgi, vacuole | 24.09 | 17.79 |
| CDX73720 | Canola | golgi, vacuole | 23.36 | 17.2 |
| CDY16306 | Canola | golgi, vacuole | 21.9 | 16.81 |
| CDX78005 | Canola | vacuole | 23.72 | 15.7 |
Protein Annotations
| EnsemblPlants:CDY70367 | EnsemblPlantsGene:GSBRNA2T00098431001 | Gene3D:2.120.10.30 | GO:A0A078JXL3 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 |
| InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 | PFAM:PF03088 | ProteinID:CDY70367 |
| ProteinID:CDY70367.1 | SUPFAM:SSF63829 | UniParc:UPI0004EE509C | UniProt:A0A078JXL3 | MapMan:50.4.3 | : |
Description
BnaAnng33490DBnaAnng33490D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JXL3]
Coordinates
chrLK041902:-:1566..2989
Molecular Weight (calculated)
30998.3 Da
IEP (calculated)
8.131
GRAVY (calculated)
-0.292
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: GNCSSHKVEP ACGRPLGLSF EKKTGDLYFC DGYFGVMKVG PKGGLAEKVV DEVEGQKIMF ANQMDIDEEE DVFYFNDSSD TYHFGDVFFA FLCGEKTGRA
101: IRYDKKSKEA KVIMDRLHFP NGLAISKDGS FVLSCEVPTQ LVHRYWAKGP KSGTRDVFAK LPGYADNIRR TEKGDFWVAL HSKRTPFSRF SLMHPWIGKF
201: FMKTLKMDLL VFLFEGGKPH AVAVKLCGKT GKVLEVLEDS EGKNMKFISE VQERDGKLWF GSVFLPSVWV LEHQ
101: IRYDKKSKEA KVIMDRLHFP NGLAISKDGS FVLSCEVPTQ LVHRYWAKGP KSGTRDVFAK LPGYADNIRR TEKGDFWVAL HSKRTPFSRF SLMHPWIGKF
201: FMKTLKMDLL VFLFEGGKPH AVAVKLCGKT GKVLEVLEDS EGKNMKFISE VQERDGKLWF GSVFLPSVWV LEHQ
001: MESLLLIAYA FLYLFLLSHE AEYKINADQS ENSNVGRFGG NYGRLGRLSG SIHHWTGEYR GLEKRPNHSE DNPPSRGWTG EPGLDPRGEG PYVGVTDGRI
101: LKWSGEDLGW IEFAYSSPHR KNCSSHKVEP ACGRPLGLSF EKKSGDLYFC DGYLGVMKVG PKGGLAEKVV DEVEGQKVMF ANQMDIDEEE DAIYFNDSSD
201: TYHFGDVFYA FLCGEKTGRA IRYDKKTKEA KVIMDRLHFP NGLALSIDGS FVLSCEVPTQ LVHRYWAKGP NAGTRDIFAK LPGYADNIRR TETGDFWVAL
301: HSKKTPFSRL SMIHPWVGKF FIKTLKMELL VFLFEGGKPH AVAVKLSGKT GEIMEILEDS EGKNMKFISE VQERDGRLWF GSVFLPSVWV LDRQ
101: LKWSGEDLGW IEFAYSSPHR KNCSSHKVEP ACGRPLGLSF EKKSGDLYFC DGYLGVMKVG PKGGLAEKVV DEVEGQKVMF ANQMDIDEEE DAIYFNDSSD
201: TYHFGDVFYA FLCGEKTGRA IRYDKKTKEA KVIMDRLHFP NGLALSIDGS FVLSCEVPTQ LVHRYWAKGP NAGTRDIFAK LPGYADNIRR TETGDFWVAL
301: HSKKTPFSRL SMIHPWVGKF FIKTLKMELL VFLFEGGKPH AVAVKLSGKT GEIMEILEDS EGKNMKFISE VQERDGRLWF GSVFLPSVWV LDRQ
Arabidopsis Description
SSL1Protein STRICTOSIDINE SYNTHASE-LIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IJZ6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.