CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35420	Canola	vacuole	97.71	97.43
CDX79944	Canola	vacuole	83.09	77.33
CDY23858	Canola	vacuole	82.52	77.01
AT2G41290.1	Thale cress	vacuole	81.66	75.8
VIT_08s0007g05360.t01	Wine grape	vacuole	51.0	47.09
KRH66810	Soybean	vacuole	49.28	45.03
CDX72079	Canola	vacuole	40.69	43.03
TraesCS5A01G131200.1	Wheat	vacuole	28.65	39.53
CDY06143	Canola	vacuole	42.41	38.54
CDX92388	Canola	vacuole	39.83	37.98
TraesCS5D01G139700.1	Wheat	vacuole	40.4	37.8
HORVU5Hr1G043200.4	Barley	vacuole	40.11	37.43
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	36.39	37.24
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	39.83	37.17
CDX95058	Canola	vacuole	39.54	36.9
CDX73037	Canola	vacuole	34.38	36.59
CDX93560	Canola	vacuole	40.69	36.13
CDX96505	Canola	vacuole	33.81	35.98
CDY16615	Canola	endoplasmic reticulum, extracellular, vacuole	40.4	35.7
KXG27696	Sorghum	vacuole	39.83	35.64
EES07950	Sorghum	vacuole	39.83	35.46
CDY70367	Canola	cytosol	26.93	34.31
CDY47397	Canola	vacuole	28.65	34.25
CDY45861	Canola	vacuole	32.38	34.24
CDY22517	Canola	vacuole	35.82	33.88
CDY47729	Canola	vacuole	31.52	33.85
CDY30959	Canola	extracellular, golgi, vacuole	35.82	33.78
CDY47728	Canola	vacuole	31.52	33.64
CDY45863	Canola	vacuole	31.23	33.54
CDX77108	Canola	vacuole	35.53	33.51
CDX96507	Canola	vacuole	31.23	33.44
CDX73039	Canola	vacuole	31.23	33.44
CDX76033	Canola	vacuole	35.82	33.24
CDY39351	Canola	extracellular, plasma membrane, vacuole	33.24	33.24
CDX72080	Canola	endoplasmic reticulum, extracellular, golgi	34.96	33.06
CDY30558	Canola	vacuole	35.24	32.98
CDX96506	Canola	vacuole	30.66	32.92
CDX79943	Canola	vacuole	34.67	32.79
CDY23857	Canola	vacuole	34.67	32.79
CDY06144	Canola	vacuole	34.67	32.79
CDY30963	Canola	vacuole	35.24	32.71
CDX76030	Canola	endoplasmic reticulum, golgi, vacuole	35.24	32.71
CDY30962	Canola	vacuole	35.24	32.71
CDX73038	Canola	vacuole	30.37	32.62
CDX67673	Canola	vacuole	34.38	32.43
CDY66188	Canola	vacuole	30.37	32.32
CDY54042	Canola	vacuole	34.1	32.16
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	39.26	31.86
CDX68204	Canola	vacuole	29.51	31.4
CDY66189	Canola	vacuole	26.07	30.64
CDX89027	Canola	endoplasmic reticulum, vacuole	34.96	30.2
CDX71901	Canola	extracellular, golgi, vacuole	34.67	30.02
CDY05993	Canola	endoplasmic reticulum, golgi, vacuole	34.67	30.02
Os11t0142400-01	Rice	extracellular	7.74	29.67
Zm00001d052471_P001	Maize	vacuole	39.83	28.6
Os11t0142300-00	Rice	extracellular, plasma membrane	8.02	25.0
CDY33279	Canola	golgi, vacuole	24.07	22.64
CDX73720	Canola	golgi, vacuole	24.07	22.58
CDY16306	Canola	golgi, vacuole	22.92	22.41
CDY16307	Canola	golgi, vacuole	23.5	22.16
CDY33280	Canola	golgi, vacuole	23.21	21.89
CDX78005	Canola	vacuole	24.36	20.53

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:A0A078G7T7	UniProt:A0A078G7T7	EnsemblPlants:CDY22515
ProteinID:CDY22515	ProteinID:CDY22515.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016844	EnsemblPlantsGene:GSBRNA2T00019090001	InterPro:IPR011042	PFAM:PF03088	PANTHER:PTHR10426
PANTHER:PTHR10426:SF29	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI0004EE0203

Description

BnaC03g23250DBnaC03g23250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7T7]

Coordinates

chrLK032132:-:316382..318512

Molecular Weight (calculated)

39095.0 Da

IEP (calculated)

9.403

GRAVY (calculated)

-0.246

Length

349 amino acids

Sequence
(BLAST)

001: MMKLFLVVAI CVALFLSLTD FSGKSPKHGE SMLTVHFPEF RLIPTTGASG PESFVFDISG EGPYTGLSDG RIVKWIANES RWIDFAVTTP TRKGCEGPHE
101: HQRTEHVCGR PLGLAFEKST GDLYIADAYM GVLKVGREGG LANQMLTRQL DEPLRFTNGL DVDPRTGVVY FTDSSSVYQR RNYIGVMMSG DRTGRLMKYD
201: PNTKQVTTLL SNLAFPNGVV LSHNGEYLLV AETAKCRILR YWLNDTSASK SRQTYEIFSD RLPGFPDNIK RSPRGGFWIG VNTKHTKLTK FAMSNVWLGR
301: AALGLSVDWM KVFEGKNGNK WMSISEVEER DRTLWVGSVN TPFVGMYKI

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.