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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004613.1-P Field mustard vacuole 99.2 99.2
CDY23858 Canola vacuole 97.33 97.59
CDY35420 Canola vacuole 77.6 83.14
CDY22515 Canola vacuole 77.33 83.09
VIT_08s0007g05360.t01 Wine grape vacuole 50.13 49.74
KRH66810 Soybean vacuole 47.47 46.6
CDX72079 Canola vacuole 38.93 44.24
CDY06143 Canola vacuole 42.67 41.67
PGSC0003DMT400048627 Potato cytosol, golgi, mitochondrion, vacuole 37.6 41.35
HORVU5Hr1G043200.4 Barley vacuole 41.07 41.18
TraesCS5D01G139700.1 Wheat vacuole 40.8 41.02
TraesCS5B01G133600.1 Wheat extracellular, vacuole 40.27 40.37
EES07950 Sorghum vacuole 41.87 40.05
KXG27696 Sorghum vacuole 41.6 40.0
TraesCS5A01G131200.1 Wheat vacuole 26.67 39.53
CDX92388 Canola vacuole 37.6 38.52
CDY16615 Canola endoplasmic reticulum, extracellular, vacuole 40.0 37.97
CDY70367 Canola cytosol 27.47 37.59
Os12t0138800-01 Rice golgi, mitochondrion, plasma membrane, vacuole 42.13 36.74
CDX93560 Canola vacuole 38.13 36.39
CDX95058 Canola vacuole 36.27 36.36
CDX76033 Canola vacuole 35.47 35.37
CDY30963 Canola vacuole 35.2 35.11
CDX73037 Canola vacuole 30.67 35.06
CDY22517 Canola vacuole 34.4 34.96
CDX77108 Canola vacuole 34.4 34.86
CDY30959 Canola extracellular, golgi, vacuole 34.4 34.86
CDY45861 Canola vacuole 30.67 34.85
CDX76030 Canola endoplasmic reticulum, golgi, vacuole 34.93 34.84
CDY30962 Canola vacuole 34.93 34.84
CDY39351 Canola extracellular, plasma membrane, vacuole 32.27 34.67
CDX73039 Canola vacuole 30.13 34.66
CDY47728 Canola vacuole 30.13 34.56
CDX96505 Canola vacuole 30.13 34.45
CDY23857 Canola vacuole 33.87 34.42
CDX79943 Canola vacuole 33.87 34.42
CDX96507 Canola vacuole 29.87 34.36
CDY30558 Canola vacuole 34.13 34.32
CDY47397 Canola vacuole 26.4 33.9
CDX67673 Canola vacuole 33.33 33.78
CDY54042 Canola vacuole 33.07 33.51
CDX72080 Canola endoplasmic reticulum, extracellular, golgi 32.8 33.33
CDX73038 Canola vacuole 28.8 33.23
CDY06144 Canola vacuole 32.53 33.06
CDY45863 Canola vacuole 28.53 32.92
CDX96506 Canola vacuole 28.53 32.92
CDY47729 Canola vacuole 28.53 32.92
CDY66188 Canola vacuole 28.27 32.32
Zm00001d052471_P001 Maize vacuole 41.07 31.69
CDX68204 Canola vacuole 27.47 31.4
CDY66189 Canola vacuole 24.27 30.64
CDX89027 Canola endoplasmic reticulum, vacuole 32.8 30.45
CDY05993 Canola endoplasmic reticulum, golgi, vacuole 32.27 30.02
CDX71901 Canola extracellular, golgi, vacuole 31.73 29.53
Os11t0142400-01 Rice extracellular 6.67 27.47
Os11t0142300-00 Rice extracellular, plasma membrane 7.73 25.89
CDY33279 Canola golgi, vacuole 23.73 23.99
CDX73720 Canola golgi, vacuole 23.73 23.92
CDY16307 Canola golgi, vacuole 23.47 23.78
CDY33280 Canola golgi, vacuole 23.2 23.51
CDY16306 Canola golgi, vacuole 21.87 22.97
CDX78005 Canola vacuole 24.0 21.74
Protein Annotations
Gene3D:2.120.10.30MapMan:50.4.3InterPro:6-blade_b-propeller_TolB-likeGO:A0A078CV85EnsemblPlants:CDX79944ProteinID:CDX79944
ProteinID:CDX79944.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0016844EnsemblPlantsGene:GSBRNA2T00132804001InterPro:IPR011042PFAM:PF03088PANTHER:PTHR10426PANTHER:PTHR10426:SF29
SUPFAM:SSF63829SignalP:SignalP-noTMInterPro:Strictosidine_synth_cons-regInterPro:Strictosidine_synthaseUniParc:UPI0004EEBEBCSEG:seg
Description
BnaA05g02120D
Coordinates
chrLK031819:+:962524..965048
Molecular Weight (calculated)
41611.5 Da
IEP (calculated)
7.026
GRAVY (calculated)
-0.236
Length
375 amino acids
Sequence
(BLAST)
001: MMKLFFVLAI SFALLLSLFD SSGESPKHGE SMLTVHFPDF HLIPTTGALG PESFAFDFYG DGPFTGLSDG RIVKWIANES RWMDFAVTTP TREGCEGPHE
101: HQRTEHECGR PLGLAFEKST GDLYIADAYM GLLKVGREGG LANQVSTRQL DKPLRFTNAV EIDPRTGVVY FTDSSSVYQR RNYIGAIMSG DRTGRLMKYD
201: PKTNQVTTLV SNLSFANGVV MSQNGDYLLV AETATSQILR YWLNDTSVSK SHEKYEIFAE GLPGFPDNIK RSPRGGFWVG LNTKHSKLTK FAMSNAWLGR
301: AALGLPVDWM KVHSYWAKYK GNGMAVRLSE GSGVISEVFE GTIGNKWISI SEVEERDGTL WVGSVNTPYT GVYKI
Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)
001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
Arabidopsis Description
SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.