CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 3
extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007294.1-P	Field mustard	vacuole	95.83	98.4
CDX72079	Canola	vacuole	83.59	97.27
AT3G57030.1	Thale cress	endoplasmic reticulum, extracellular, golgi	83.85	86.1
Solyc10g079610.1.1	Tomato	vacuole	63.28	65.32
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	62.5	64.86
PGSC0003DMT400076777	Potato	vacuole	62.76	64.78
CDY70367	Canola	cytosol	35.16	49.27
CDX92388	Canola	vacuole	45.57	47.81
CDY16615	Canola	endoplasmic reticulum, extracellular, vacuole	48.7	47.34
CDY22517	Canola	vacuole	45.05	46.88
CDX79943	Canola	vacuole	43.75	45.53
CDY23857	Canola	vacuole	43.49	45.26
CDX95058	Canola	vacuole	43.49	44.65
CDX93560	Canola	vacuole	45.31	44.27
CDY30962	Canola	vacuole	43.23	44.15
CDX76030	Canola	endoplasmic reticulum, golgi, vacuole	42.97	43.88
CDX76033	Canola	vacuole	42.45	43.35
CDY30963	Canola	vacuole	42.19	43.09
CDX79944	Canola	vacuole	41.67	42.67
CDY35420	Canola	vacuole	38.8	42.57
CDX72080	Canola	endoplasmic reticulum, extracellular, golgi	40.89	42.55
CDY22515	Canola	vacuole	38.54	42.41
CDY23858	Canola	vacuole	41.15	42.25
CDX67673	Canola	vacuole	40.1	41.62
CDX77108	Canola	vacuole	40.1	41.62
CDY06144	Canola	vacuole	39.84	41.46
CDY30558	Canola	vacuole	40.1	41.29
CDY54042	Canola	vacuole	39.58	41.08
CDY47397	Canola	vacuole	30.99	40.75
CDY30959	Canola	extracellular, golgi, vacuole	39.06	40.54
CDY39351	Canola	extracellular, plasma membrane, vacuole	36.2	39.83
CDY45861	Canola	vacuole	33.33	38.79
CDY47728	Canola	vacuole	32.55	38.23
CDX73039	Canola	vacuole	32.03	37.73
CDX73037	Canola	vacuole	31.77	37.2
CDX96507	Canola	vacuole	31.51	37.12
CDX96506	Canola	vacuole	31.25	36.92
CDX73038	Canola	vacuole	31.25	36.92
CDX96505	Canola	vacuole	31.25	36.59
CDX89027	Canola	endoplasmic reticulum, vacuole	38.28	36.39
CDY47729	Canola	vacuole	30.73	36.31
CDX71901	Canola	extracellular, golgi, vacuole	38.02	36.23
CDY45863	Canola	vacuole	30.47	36.0
CDX68204	Canola	vacuole	30.73	35.98
CDY66188	Canola	vacuole	30.73	35.98
CDY05993	Canola	endoplasmic reticulum, golgi, vacuole	37.5	35.73
CDY66189	Canola	vacuole	27.6	35.69
CDY16306	Canola	golgi, vacuole	22.92	24.65
CDY16307	Canola	golgi, vacuole	23.7	24.59
CDY33280	Canola	golgi, vacuole	23.44	24.32
CDX73720	Canola	golgi, vacuole	23.44	24.19
CDY33279	Canola	golgi, vacuole	23.18	23.99
CDX78005	Canola	vacuole	23.7	21.98

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:A0A078F319	EnsemblPlants:CDY06143	ProteinID:CDY06143
ProteinID:CDY06143.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016844	EnsemblPlantsGene:GSBRNA2T00122029001	InterPro:IPR011042	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22
SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI0004EE6389	SEG:seg

Description

BnaA09g36370D

Coordinates

chrLK031967:+:995746..998085

Molecular Weight (calculated)

42045.5 Da

IEP (calculated)

8.594

GRAVY (calculated)

-0.062

Length

384 amino acids

Sequence
(BLAST)

001: MTMLTVFFST AIVTIIAVLA SLSSQKGSGV FAPPKIAGSR DVFPSAKVLN LTGASGPESI AFDPSGEGPY VGVSDGRVLK WRGESLGWSD FAYTSANREK
101: CVRPFAPELE HVCGRSLGSG ANPGCPHRLR FDEKTGDLYI ADAYFGLMIV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEH QDVIYFTDTS TRFQRRQFLA
201: AVLNVDKTGR LIKYDRSSKK VTVLVQGIAF ANGVALSKDR SFVLVAETTT CKILRLWLSG PNAGTQDVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK
301: LSLSQAWFRD LLLRFPISGP RLHSLFTGGR PHATAMKLSE SGEVLEVLED REGKRLRFIS EVEEKDGKLW IGSVLMPFLG VYDL

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [extracellular,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.