Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72079 | Canola | vacuole | 76.74 | 86.97 |
| Bra007294.1-P | Field mustard | vacuole | 85.56 | 85.56 |
| CDY06143 | Canola | vacuole | 86.1 | 83.85 |
| Solyc10g079610.1.1 | Tomato | vacuole | 66.31 | 66.67 |
| PGSC0003DMT400076777 | Potato | vacuole | 65.51 | 65.86 |
| VIT_08s0007g05370.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 64.44 | 65.14 |
| AT5G22020.2 | Thale cress | vacuole | 51.07 | 48.35 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 48.4 | 46.41 |
| AT3G57010.1 | Thale cress | extracellular, golgi, vacuole | 46.52 | 46.28 |
| AT2G41290.1 | Thale cress | vacuole | 45.72 | 45.48 |
| AT3G57020.1 | Thale cress | vacuole | 44.38 | 44.86 |
| AT2G41300.1 | Thale cress | vacuole | 44.38 | 42.13 |
| AT1G74010.1 | Thale cress | vacuole | 34.76 | 40.0 |
| AT1G74000.1 | Thale cress | vacuole | 34.22 | 38.91 |
| AT3G59530.3 | Thale cress | golgi, vacuole | 41.44 | 38.46 |
| AT1G74020.1 | Thale cress | vacuole | 33.96 | 37.91 |
| AT3G51420.1 | Thale cress | golgi, vacuole | 24.6 | 24.86 |
| AT3G51440.1 | Thale cress | golgi, vacuole | 24.6 | 24.8 |
| AT3G51450.1 | Thale cress | vacuole | 24.33 | 24.53 |
| AT3G51430.1 | Thale cress | golgi, vacuole | 24.33 | 24.53 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EntrezGene:824870 | ProteinID:AEE79601.1 | EMBL:AK227831 |
| ArrayExpress:AT3G57030 | EnsemblPlantsGene:AT3G57030 | RefSeq:AT3G57030 | TAIR:AT3G57030 | RefSeq:AT3G57030-TAIR-G | EnsemblPlants:AT3G57030.1 |
| TAIR:AT3G57030.1 | EMBL:BT023417 | EMBL:BT026464 | ProteinID:CAB72173.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009505 |
| GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | GO:GO:0030312 |
| InterPro:IPR011042 | RefSeq:NP_191262.2 | PFAM:PF03088 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF22 |
| UniProt:Q4V3D9 | SUPFAM:SSF63829 | SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TMHMM:TMhelix |
| UniParc:UPI0000197034 | SEG:seg | : | : | : | : |
Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
Coordinates
chr3:-:21101454..21103719
Molecular Weight (calculated)
41003.4 Da
IEP (calculated)
8.081
GRAVY (calculated)
0.009
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.