Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- vacuole 8
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92388 | Canola | vacuole | 83.54 | 90.16 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 90.13 | 90.13 |
| Bra002383.1-P | Field mustard | vacuole | 90.13 | 90.13 |
| HORVU5Hr1G114720.1 | Barley | plastid | 31.39 | 65.26 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 63.54 | 64.36 |
| GSMUA_Achr3P30810_001 | Banana | endoplasmic reticulum, vacuole | 63.29 | 64.27 |
| EER90869 | Sorghum | vacuole | 64.05 | 63.57 |
| Os03t0750700-01 | Rice | plasma membrane | 62.28 | 61.65 |
| TraesCS5A01G390200.1 | Wheat | golgi | 61.01 | 60.55 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 61.01 | 60.4 |
| HORVU5Hr1G095260.1 | Barley | extracellular | 61.01 | 60.4 |
| TraesCS5D01G400000.1 | Wheat | golgi | 60.76 | 60.3 |
| GSMUA_Achr8P04740_001 | Banana | endoplasmic reticulum, golgi, vacuole | 62.53 | 59.52 |
| HORVU5Hr1G114800.1 | Barley | extracellular | 30.13 | 55.35 |
| AT3G57030.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 48.35 | 51.07 |
| Zm00001d034032_P001 | Maize | plasma membrane | 63.8 | 46.75 |
| AT3G59530.3 | Thale cress | golgi, vacuole | 42.78 | 41.94 |
| AT3G57010.1 | Thale cress | extracellular, golgi, vacuole | 39.24 | 41.22 |
| AT3G57020.1 | Thale cress | vacuole | 37.97 | 40.54 |
| HORVU6Hr1G025030.1 | Barley | cytosol | 11.39 | 40.54 |
| AT2G41290.1 | Thale cress | vacuole | 37.72 | 39.63 |
| AT2G41300.1 | Thale cress | vacuole | 36.2 | 36.29 |
| AT1G74000.1 | Thale cress | vacuole | 29.37 | 35.26 |
| AT1G74010.1 | Thale cress | vacuole | 28.1 | 34.15 |
| AT1G74020.1 | Thale cress | vacuole | 27.34 | 32.24 |
| AT3G51420.1 | Thale cress | golgi, vacuole | 24.56 | 26.22 |
| AT3G51430.1 | Thale cress | golgi, vacuole | 24.05 | 25.61 |
| AT3G51450.1 | Thale cress | vacuole | 23.8 | 25.34 |
| AT3G51440.1 | Thale cress | golgi, vacuole | 23.8 | 25.34 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EntrezGene:832262 | UniProt:A0A178ULZ6 | ProteinID:AED92969.1 |
| ProteinID:ANM69952.1 | ProteinID:ANM69953.1 | ArrayExpress:AT5G22020 | EnsemblPlantsGene:AT5G22020 | RefSeq:AT5G22020 | TAIR:AT5G22020 |
| RefSeq:AT5G22020-TAIR-G | EnsemblPlants:AT5G22020.2 | Unigene:At.10335 | EMBL:BT014895 | EMBL:BT025622 | ProteinID:CAC34495.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | InterPro:IPR011042 | RefSeq:NP_001331596.1 |
| RefSeq:NP_001331597.1 | RefSeq:NP_680189.1 | ProteinID:OAO94054.1 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 |
| UniProt:Q9C586 | SUPFAM:SSF63829 | SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | UniParc:UPI00000A65AC |
| SEG:seg | : | : | : | : | : |
Description
At5g22020 [Source:UniProtKB/TrEMBL;Acc:Q9C586]
Coordinates
chr5:-:7287675..7289646
Molecular Weight (calculated)
44530.2 Da
IEP (calculated)
6.996
GRAVY (calculated)
-0.159
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MALFLSPKTI TLLFFSLSLA LYCSIDPFHH CAISDFPNFV SHEVISPRPD EVPWERDSQN SLQKSKILFF NQIQGPESVA FDSLGRGPYT GVADGRVLFW
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.