Factsheet for GSMUA_Achr8P04740_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P30810_001	Banana	endoplasmic reticulum, vacuole	69.64	74.29
VIT_06s0009g00850.t01	Wine grape	cytosol	60.72	71.79
PGSC0003DMT400007732	Potato	vacuole	62.41	66.24
PGSC0003DMT400015199	Potato	vacuole	61.93	65.73
Solyc11g071800.1.1	Tomato	plastid, vacuole	61.45	65.22
CDX92388	Canola	vacuole	57.35	65.03
CDX95058	Canola	vacuole	58.55	64.97
Bra018623.1-P	Field mustard	cytosol	54.7	64.67
Solyc06g073910.2.1	Tomato	cytosol, plasma membrane, vacuole	46.02	62.83
AT1G08470.1	Thale cress	endoplasmic reticulum, vacuole	59.04	62.82
AT5G22020.2	Thale cress	vacuole	59.52	62.53
CDY16615	Canola	endoplasmic reticulum, extracellular, vacuole	59.28	62.28
CDX93560	Canola	vacuole	58.07	61.32
Bra002383.1-P	Field mustard	vacuole	58.31	61.27
KRH26734	Soybean	vacuole	53.73	61.1
KRH56180	Soybean	endoplasmic reticulum	63.61	59.86
KRH22599	Soybean	vacuole	51.81	55.84
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	35.18	47.1
GSMUA_Achr5P05340_001	Banana	vacuole	35.42	40.95
GSMUA_Achr11P...	Banana	golgi, vacuole	31.33	33.85
GSMUA_Achr11P...	Banana	golgi, vacuole	26.02	30.08
GSMUA_AchrUn_...	Banana	plastid	16.63	27.6

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016844
EnsemblPlantsGene:GSMUA_Achr8G04740_001	EnsemblPlants:GSMUA_Achr8P04740_001	EnsemblPlants:GSMUA_Achr8T04740_001	InterPro:IPR011042	UniProt:M0TMM7	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF24	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
UniParc:UPI0002949DB8	SEG:seg	:	:	:	:

Description

Putative Adipocyte plasma membrane-associated protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G04740_001]

Coordinates

chr8:-:3149492..3153367

Molecular Weight (calculated)

46305.4 Da

IEP (calculated)

5.735

GRAVY (calculated)

-0.203

Length

415 amino acids

Sequence
(BLAST)

001: MGILEKGLDF IVFLFSYPCL HACLRFRDKK AVRLEHRGNR DIRREEPREA ATMAAAAVVI GGVVLLVALY CGLDPFGHSP MAAFPGFEAY PIEVPSWSEL
101: PTARDAEDRL QRAEIKFLNQ VQGPESVAFD PQGRGPYTGV ADGRVVFWDG ESWSDFAYTS PNRSEICNPK PSPLSYLKNE HICGRPLGLR FDKKTGELYI
201: ADAYFGLLKV GPEGGLATPV TTEAEGIPLK FTNDLDIDED GSIYFTDSST NYQRRNFMQL VFTGEPSGRL LKYNPVMKET TVLLRGLQFP NGVTLSKDGS
301: FFLFCEGSRG RLSRYWLKGE KAGTSDVFAV LPGFPDNVRT NEKGEFWVAI HCRLSMYTHL TSRPHAVIIK YSPDGELLEI LEDSQGKVVR AVSEVEEKDG
401: KLWIGSVLMP FIAVY

Best Arabidopsis Sequence Match ( AT5G22020.2 )
(BLAST)

001: MALFLSPKTI TLLFFSLSLA LYCSIDPFHH CAISDFPNFV SHEVISPRPD EVPWERDSQN SLQKSKILFF NQIQGPESVA FDSLGRGPYT GVADGRVLFW
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL

Arabidopsis Description

At5g22020 [Source:UniProtKB/TrEMBL;Acc:Q9C586]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.