Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 8
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22599 | Soybean | vacuole | 76.71 | 72.73 |
| VIT_06s0009g00850.t01 | Wine grape | cytosol | 64.66 | 67.24 |
| Solyc11g071800.1.1 | Tomato | plastid, vacuole | 65.75 | 61.38 |
| KRH56180 | Soybean | endoplasmic reticulum | 73.97 | 61.22 |
| PGSC0003DMT400015199 | Potato | vacuole | 65.48 | 61.13 |
| PGSC0003DMT400007732 | Potato | vacuole | 65.21 | 60.87 |
| Bra018623.1-P | Field mustard | cytosol | 58.08 | 60.4 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 64.11 | 60.0 |
| CDX95058 | Canola | vacuole | 60.27 | 58.82 |
| CDX93560 | Canola | vacuole | 63.29 | 58.78 |
| Solyc06g073910.2.1 | Tomato | cytosol, plasma membrane, vacuole | 48.49 | 58.22 |
| GSMUA_Achr3P30810_001 | Banana | endoplasmic reticulum, vacuole | 60.82 | 57.07 |
| EER90869 | Sorghum | vacuole | 60.0 | 55.03 |
| GSMUA_Achr8P04740_001 | Banana | endoplasmic reticulum, golgi, vacuole | 61.1 | 53.73 |
| TraesCS5A01G390200.1 | Wheat | golgi | 57.81 | 53.02 |
| TraesCS5D01G400000.1 | Wheat | golgi | 57.53 | 52.76 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 57.53 | 52.63 |
| HORVU5Hr1G095260.1 | Barley | extracellular | 56.99 | 52.13 |
| Os03t0750700-01 | Rice | plasma membrane | 56.99 | 52.13 |
| HORVU5Hr1G114800.1 | Barley | extracellular | 30.41 | 51.63 |
| HORVU5Hr1G114720.1 | Barley | plastid | 26.58 | 51.05 |
| KRG95135 | Soybean | endoplasmic reticulum | 41.64 | 40.97 |
| KRH66809 | Soybean | endoplasmic reticulum | 41.64 | 40.97 |
| Zm00001d034032_P001 | Maize | plasma membrane | 60.0 | 40.63 |
| HORVU6Hr1G025030.1 | Barley | cytosol | 11.51 | 37.84 |
| KRH10120 | Soybean | endoplasmic reticulum | 38.63 | 34.39 |
| KRH45407 | Soybean | nucleus | 32.88 | 34.38 |
| KRH07462 | Soybean | vacuole | 32.33 | 34.01 |
| KRH23218 | Soybean | golgi, vacuole | 38.08 | 33.9 |
| KRH66810 | Soybean | vacuole | 33.97 | 32.46 |
| KRH56734 | Soybean | vacuole | 27.67 | 29.53 |
| KRH03206 | Soybean | vacuole | 27.12 | 29.46 |
| KRH54773 | Soybean | vacuole | 26.3 | 28.49 |
| KRH37504 | Soybean | vacuole | 23.01 | 23.46 |
| KRH07935 | Soybean | endoplasmic reticulum | 23.84 | 23.02 |
| KRH69689 | Soybean | plastid | 24.66 | 22.73 |
| KRH69688 | Soybean | golgi, vacuole | 22.47 | 22.34 |
| KRH63133 | Soybean | peroxisome, vacuole | 10.14 | 21.39 |
| KRH37503 | Soybean | vacuole | 17.81 | 20.7 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EMBL:ACUP02007744 | EnsemblPlantsGene:GLYMA_12G190600 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | UniProt:I1LU20 | InterPro:IPR011042 | EnsemblPlants:KRH26734 |
| ProteinID:KRH26734 | ProteinID:KRH26734.1 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 | SUPFAM:SSF63829 |
| SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | UniParc:UPI000295285C | : | : |
Description
hypothetical protein
Coordinates
chr12:+:35231035..35234420
Molecular Weight (calculated)
40834.4 Da
IEP (calculated)
8.838
GRAVY (calculated)
-0.069
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLPRGFSIV FLLLALYCAL DPFEPSPIVG FPPFDVHKID MPAWSEVPTD RDKDNSLLKS ELLFVNQVQG PESIAFDPLG RDPYTGVADG RILFWNGQSW
101: TDFAYTSPNR SEQYNPKASA SPMSYVKTEH ICGRPLGLRF DKKSGDLYIA DAYFGLMKVG PQGGLATSLA TEAEGVPLRF TIDVDIDTEG NLYFTDSSTN
201: FQRSNFIQLV LSGEAKTTVL MRNVQFPNGI SLSKDGTFFV FSKGMIGRLR KYWLKGDKAG TSEILAILPV FLTTRYMYSY LNSLYPKMRK VILKLPIPTR
301: IQYMFHIGGR FHAVAVKYSP EGKLLRILED SEGKVVRAVS AVEEKDGKLW VGSVLMPFMA VHNLT
101: TDFAYTSPNR SEQYNPKASA SPMSYVKTEH ICGRPLGLRF DKKSGDLYIA DAYFGLMKVG PQGGLATSLA TEAEGVPLRF TIDVDIDTEG NLYFTDSSTN
201: FQRSNFIQLV LSGEAKTTVL MRNVQFPNGI SLSKDGTFFV FSKGMIGRLR KYWLKGDKAG TSEILAILPV FLTTRYMYSY LNSLYPKMRK VILKLPIPTR
301: IQYMFHIGGR FHAVAVKYSP EGKLLRILED SEGKVVRAVS AVEEKDGKLW VGSVLMPFMA VHNLT
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.