Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 6
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH07935 | Soybean | endoplasmic reticulum | 90.19 | 87.57 |
KRH69689 | Soybean | plastid | 59.13 | 54.8 |
VIT_04s0210g00060.t01 | Wine grape | cytosol, mitochondrion | 40.05 | 54.65 |
VIT_04s0210g00100.t01 | Wine grape | cytosol | 25.34 | 53.14 |
PGSC0003DMT400003995 | Potato | golgi, vacuole | 52.32 | 51.34 |
VIT_04s0210g00120.t01 | Wine grape | vacuole | 52.32 | 50.66 |
Solyc02g082900.2.1 | Tomato | vacuole | 50.95 | 50.4 |
VIT_04s0210g00080.t01 | Wine grape | vacuole | 52.04 | 50.4 |
Os10t0543500-01 | Rice | plasma membrane | 34.06 | 49.02 |
AT3G51430.1 | Thale cress | golgi, vacuole | 49.32 | 48.79 |
VIT_04s0210g00090.t01 | Wine grape | mitochondrion, vacuole | 25.89 | 48.47 |
CDY16307 | Canola | golgi, vacuole | 48.77 | 48.38 |
CDY33280 | Canola | golgi, vacuole | 48.5 | 48.11 |
VIT_04s0210g00130.t01 | Wine grape | plasma membrane, vacuole | 37.33 | 47.9 |
CDY33279 | Canola | golgi, vacuole | 48.23 | 47.71 |
Bra038899.1-P | Field mustard | golgi, vacuole | 48.23 | 47.71 |
CDX73720 | Canola | golgi, vacuole | 48.23 | 47.58 |
AT3G51440.1 | Thale cress | golgi, vacuole | 47.96 | 47.44 |
AT3G51420.1 | Thale cress | golgi, vacuole | 47.68 | 47.3 |
AT3G51450.1 | Thale cress | vacuole | 47.68 | 47.17 |
CDY16306 | Canola | golgi, vacuole | 45.78 | 47.06 |
VIT_04s0210g00050.t01 | Wine grape | plastid | 51.77 | 45.56 |
TraesCS1A01G203800.1 | Wheat | cytosol, plastid, vacuole | 30.25 | 45.49 |
HORVU1Hr1G052450.8 | Barley | extracellular, golgi, vacuole | 45.23 | 45.11 |
TraesCS1D01G207200.2 | Wheat | extracellular, golgi, vacuole | 44.69 | 44.69 |
TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 44.41 | 44.41 |
GSMUA_AchrUn_... | Banana | plastid | 29.7 | 43.6 |
Bra038898.1-P | Field mustard | golgi, vacuole | 47.14 | 43.58 |
CDX78005 | Canola | vacuole | 47.96 | 42.51 |
Bra036798.1-P | Field mustard | vacuole | 47.68 | 42.27 |
OQU92210 | Sorghum | golgi, plastid, vacuole | 46.87 | 38.83 |
VIT_04s0210g00040.t01 | Wine grape | cytosol, peroxisome, vacuole | 33.79 | 33.07 |
KRH37504 | Soybean | vacuole | 28.07 | 28.77 |
KRH37503 | Soybean | vacuole | 22.62 | 26.43 |
KRH54773 | Soybean | vacuole | 23.71 | 25.82 |
KRG95135 | Soybean | endoplasmic reticulum | 25.61 | 25.34 |
KRH66809 | Soybean | endoplasmic reticulum | 25.61 | 25.34 |
KRH03206 | Soybean | vacuole | 22.62 | 24.7 |
VIT_04s0210g00030.t01 | Wine grape | vacuole | 51.77 | 24.58 |
KRH56734 | Soybean | vacuole | 22.34 | 23.98 |
KRH07462 | Soybean | vacuole | 22.62 | 23.92 |
KRH66810 | Soybean | vacuole | 24.8 | 23.82 |
KRH45407 | Soybean | nucleus | 22.62 | 23.78 |
KRH22599 | Soybean | vacuole | 24.25 | 23.12 |
KRH56180 | Soybean | endoplasmic reticulum | 27.52 | 22.9 |
KRH26734 | Soybean | vacuole | 22.34 | 22.47 |
KRH23218 | Soybean | golgi, vacuole | 24.8 | 22.2 |
KRH10120 | Soybean | endoplasmic reticulum | 24.8 | 22.2 |
KRH63133 | Soybean | peroxisome, vacuole | 10.35 | 21.97 |
Protein Annotations
EntrezGene:100813217 | Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EMBL:ACUP02000728 | EnsemblPlantsGene:GLYMA_02G042300 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016787 |
GO:GO:0016788 | GO:GO:0016844 | UniProt:I1JCB3 | InterPro:IPR011042 | EnsemblPlants:KRH69688 | ProteinID:KRH69688 |
ProteinID:KRH69688.1 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF58 | SUPFAM:SSF63829 | InterPro:Strictosidine_synth_cons-reg |
InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI0002336F49 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:3980929..3984283
Molecular Weight (calculated)
40418.5 Da
IEP (calculated)
5.005
GRAVY (calculated)
0.036
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRLWFSTPF FVIILPVAVA ALFFRLEPFD PGFLPVQLGR STVAVPASNG HVRVGSEAMG EGHLEGPEDL AYDAAARVVY TGCEDGWIKR VTVNDSVLDS
101: AVEDWVNTGG RPLGLTLKPN GELIVADAEK GLLRVSSERE IELLVDEYEG LKFKLTDGVD VADDGTIYFT DASHKYPVKD AVLDILEGKP NGRFFSYNPA
201: TKKTTLLAKD LYFANGVAVS ADQQFVVFCE SVLMICEKYY VQGPKKGTIE KFCDLPGMPD NIHYDGQGHY LIAMVTALTP ELELAYRYPF IRKTFAIVTK
301: YVGSLPISKN GGVLVVDLEG KPTAHYYDPK LSLTSAIKIG NHIYGGSIFY PFVTRFDIEK YPALPTV
101: AVEDWVNTGG RPLGLTLKPN GELIVADAEK GLLRVSSERE IELLVDEYEG LKFKLTDGVD VADDGTIYFT DASHKYPVKD AVLDILEGKP NGRFFSYNPA
201: TKKTTLLAKD LYFANGVAVS ADQQFVVFCE SVLMICEKYY VQGPKKGTIE KFCDLPGMPD NIHYDGQGHY LIAMVTALTP ELELAYRYPF IRKTFAIVTK
301: YVGSLPISKN GGVLVVDLEG KPTAHYYDPK LSLTSAIKIG NHIYGGSIFY PFVTRFDIEK YPALPTV
001: MPMFYSSRFL FFFTIVPLLV SIALYQLDTF DPAPVPSEAY ASSTTSIPPL ISDKYLTGAE FIGVGLLDKP EDIAYHQDSN LIYTGCIDGW VKRVSVHDSA
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L
Arabidopsis Description
SSL5Protein STRICTOSIDINE SYNTHASE-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAZ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.