Factsheet for Bra036798.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P
Bra027174.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51450.1	Bra030034.1-P	AT1G27300.1	21798944
AT3G51450.1	Bra032817.1-P	AT1G27300.1	21798944
AT3G51450.1	Bra027174.1-P	AT3G16310.1	21798944
AT3G51450.1	Bra012567.1-P	AT4G19030.1	21798944
AT3G51450.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78005	Canola	vacuole	98.79	98.79
Bra038899.1-P	Field mustard	golgi, vacuole	70.05	78.17
AT3G51430.1	Thale cress	golgi, vacuole	68.6	76.55
AT3G51450.1	Thale cress	vacuole	67.15	74.93
AT3G51440.1	Thale cress	golgi, vacuole	66.91	74.66
AT3G51420.1	Thale cress	golgi, vacuole	64.49	72.16
Bra038898.1-P	Field mustard	golgi, vacuole	66.91	69.77
VIT_04s0210g00060.t01	Wine grape	cytosol, mitochondrion	34.3	52.79
PGSC0003DMT400003995	Potato	golgi, vacuole	46.86	51.87
Solyc02g082900.2.1	Tomato	vacuole	45.17	50.4
VIT_04s0210g00120.t01	Wine grape	vacuole	45.41	49.6
VIT_04s0210g00080.t01	Wine grape	vacuole	45.17	49.34
Os10t0543500-01	Rice	plasma membrane	30.19	49.02
VIT_04s0210g00090.t01	Wine grape	mitochondrion, vacuole	22.95	48.47
VIT_04s0210g00130.t01	Wine grape	plasma membrane, vacuole	33.33	48.25
KRH69688	Soybean	golgi, vacuole	42.27	47.68
VIT_04s0210g00050.t01	Wine grape	plastid	47.83	47.48
VIT_04s0210g00100.t01	Wine grape	cytosol	20.05	47.43
KRH07935	Soybean	endoplasmic reticulum	41.79	45.77
TraesCS1A01G203800.1	Wheat	cytosol, plastid, vacuole	26.81	45.49
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	40.1	45.11
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	39.86	44.96
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	39.37	44.41
GSMUA_AchrUn_...	Banana	plastid	26.81	44.4
KRH69689	Soybean	plastid	38.16	39.9
OQU92210	Sorghum	golgi, plastid, vacuole	40.58	37.92
VIT_04s0210g00040.t01	Wine grape	cytosol, peroxisome, vacuole	32.13	35.47
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	15.22	26.81
Bra018623.1-P	Field mustard	cytosol	22.71	26.78
VIT_04s0210g00030.t01	Wine grape	vacuole	45.65	24.45
Bra004613.1-P	Field mustard	vacuole	21.98	24.27
Bra008126.1-P	Field mustard	vacuole	19.08	24.16
Bra007294.1-P	Field mustard	vacuole	21.74	24.06
Bra002383.1-P	Field mustard	vacuole	22.71	23.8
Bra000222.1-P	Field mustard	cytosol	19.81	23.77
Bra008124.1-P	Field mustard	vacuole	18.6	23.69
Bra008127.1-P	Field mustard	vacuole	18.36	23.17
Bra015943.1-P	Field mustard	vacuole	18.12	23.01
Bra003820.1-P	Field mustard	vacuole	17.87	22.91
Bra007457.1-P	Field mustard	golgi, vacuole	22.46	22.52
Bra014536.1-P	Field mustard	vacuole	22.22	22.22
Bra007293.1-P	Field mustard	vacuole	19.57	21.95
Bra034344.1-P	Field mustard	vacuole	19.57	21.89
Bra004614.1-P	Field mustard	vacuole	19.08	21.41
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	19.08	21.35
Bra003263.1-P	Field mustard	vacuole	19.08	21.35
Bra000223.1-P	Field mustard	vacuole	18.84	21.14
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	17.87	19.42
Bra015944.1-P	Field mustard	vacuole	16.43	11.39

Protein Annotations

EnsemblPlants:Bra036798.1	EnsemblPlants:Bra036798.1-P	EnsemblPlantsGene:Bra036798	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF58	PFAM:PF03088	SUPFAM:SSF63829
UniParc:UPI0002542CDA	UniProt:M4F6T8	MapMan:50.4.3	:	:	:

Description

AT3G51430 (E=7e-166) YLS2 | YLS2; strictosidine synthase

Coordinates

chrA09:+:25742725..25744818

Molecular Weight (calculated)

45572.1 Da

IEP (calculated)

6.929

GRAVY (calculated)

0.110

Length

414 amino acids

Sequence
(BLAST)

001: MPLLSFSRRF LIFSTVIPFL ASIALYRLDT FDPALLPPNA LDYSTTSLPP LSNDKLLTGA ELIGVGLLNS PEDIAYHRES NLIYTGCVDG WVKRVKVTES
101: VNDSVVEDWV NTGGRPLGVA FGLHGEVIVA DAYKGLLNIS GDGKKTELLT DEADGVKFKL ADAVAVADNG VLYFTDASYK YNMRQFAFDI LEGKPHGRLM
201: SFDPTTRTTR VLLKDLYFAN GVSMSPDQTH LIFCETPMRR CSKYYINEER VEVFTQGLPG YPDNIRFDGE GHYWIAMPSG VTVLWKLAFR YPFLRKLTAI
301: AANYGLDPLI FMANAGVLGV DLDGKPIALY HDHKLSHMTT GVKIGRYLYL KDTLLVGPPQ VVISGRVGLA STYGFGLWAS FKELFGAPFL VGCCVSGAGK
401: YLKRGFAAIE CCTS

Best Arabidopsis Sequence Match ( AT3G51430.1 )
(BLAST)

001: MPMFYSSRFL FFFTIVPLLV SIALYQLDTF DPAPVPSEAY ASSTTSIPPL ISDKYLTGAE FIGVGLLDKP EDIAYHQDSN LIYTGCIDGW VKRVSVHDSA
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L

Arabidopsis Description

SSL5Protein STRICTOSIDINE SYNTHASE-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAZ7]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.