Factsheet for Bra008125.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 2
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008124.1-P	Field mustard	vacuole	100.0	72.31
CDY47729	Canola	vacuole	99.57	72.0
AT1G74000.1	Thale cress	vacuole	84.26	60.18
Bra008127.1-P	Field mustard	vacuole	79.57	57.01
Bra015943.1-P	Field mustard	vacuole	76.17	54.91
Bra008126.1-P	Field mustard	vacuole	74.89	53.82
Bra003820.1-P	Field mustard	vacuole	60.85	44.27
KRH63133	Soybean	peroxisome, vacuole	28.94	39.31
Zm00001d029115_P001	Maize	extracellular, vacuole	35.74	35.9
PGSC0003DMT400056839	Potato	vacuole	42.98	32.37
Bra015944.1-P	Field mustard	vacuole	81.7	32.16
VIT_17s0000g04600.t01	Wine grape	vacuole	46.81	32.07
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	34.47	31.89
HORVU6Hr1G026020.1	Barley	cytosol	33.62	31.85
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	21.7	31.68
KRH54773	Soybean	vacuole	44.26	30.86
Solyc03g114560.2.1	Tomato	extracellular	42.55	30.58
TraesCS3B01G559000.1	Wheat	cytosol	24.26	30.48
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	40.0	30.32
TraesCS3B01G558800.1	Wheat	cytosol	26.81	30.14
TraesCS7A01G138300.1	Wheat	cytosol	26.81	30.14
TraesCS7A01G138700.1	Wheat	cytosol	26.81	30.14
TraesCS7D01G076600.1	Wheat	cytosol	26.81	30.14
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.83	29.77
Solyc12g039070.1.1	Tomato	nucleus	42.13	29.73
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	34.89	29.6
PGSC0003DMT400063277	Potato	vacuole	41.7	29.52
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	43.4	29.48
TraesCS7D01G076500.1	Wheat	cytosol	23.83	29.47
Solyc03g114550.1.1	Tomato	vacuole	34.04	29.2
TraesCS5D01G202700.1	Wheat	vacuole	42.98	29.19
PGSC0003DMT400063286	Potato	vacuole	41.28	29.04
Solyc03g114530.2.1	Tomato	vacuole	40.43	28.61
KRH03206	Soybean	vacuole	40.85	28.57
Solyc03g114540.1.1	Tomato	vacuole	40.85	28.57
KRH56734	Soybean	vacuole	41.28	28.36
TraesCSU01G240600.1	Wheat	cytosol	22.55	28.04
TraesCSU01G255900.1	Wheat	cytosol	22.55	28.04
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	40.85	27.99
PGSC0003DMT400063274	Potato	vacuole	40.0	27.98
OQU75879	Sorghum	vacuole	35.74	27.45
TraesCS3B01G289800.1	Wheat	vacuole	39.15	27.38
TraesCS3D01G303900.1	Wheat	cytosol	37.02	27.19
EER96671	Sorghum	endoplasmic reticulum, golgi	40.43	27.14
TraesCS3A01G256600.1	Wheat	vacuole	38.72	27.08
TraesCS5B01G383000.1	Wheat	vacuole	38.72	26.84
TraesCS3A01G298200.1	Wheat	cytosol	35.74	26.5
TraesCS5B01G382800.1	Wheat	vacuole	38.3	26.39
TraesCS3D01G503900.1	Wheat	nucleus	34.89	26.37
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	42.13	26.26
HORVU5Hr1G093840.1	Barley	vacuole	37.87	26.25
HORVU3Hr1G065520.3	Barley	extracellular	35.74	26.09
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	20.43	25.95
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	39.15	25.77
EER90208	Sorghum	vacuole	37.87	25.72
EES05895	Sorghum	golgi, vacuole	37.87	25.72
EES07680	Sorghum	golgi, vacuole	37.87	25.72
TraesCS5D01G389100.1	Wheat	plastid, vacuole	38.72	25.63
GSMUA_Achr5P05340_001	Banana	vacuole	39.15	25.63
EES05427	Sorghum	vacuole	37.02	25.29
Os01t0698200-00	Rice	mitochondrion	31.06	25.17
Zm00001d029117_P001	Maize	vacuole	36.17	25.15
OQU85880	Sorghum	golgi, vacuole	37.02	25.14
EES01763	Sorghum	vacuole	36.6	24.93
Zm00001d012252_P001	Maize	vacuole	36.6	24.93
Bra007294.1-P	Field mustard	vacuole	39.57	24.87
Os07t0543600-00	Rice	golgi, vacuole	37.02	24.86
Zm00001d029111_P001	Maize	vacuole	35.74	24.85
Bra018623.1-P	Field mustard	cytosol	37.02	24.79
TraesCS2D01G076200.1	Wheat	vacuole	36.17	24.78
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	36.17	24.78
Zm00001d012375_P001	Maize	vacuole	35.32	24.78
TraesCS1A01G437900.1	Wheat	cytosol	19.57	24.73
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	37.45	24.72
Zm00001d012249_P001	Maize	vacuole	36.17	24.64
Zm00001d012366_P001	Maize	vacuole	36.17	24.64
Zm00001d012368_P001	Maize	golgi, vacuole	36.17	24.64
Zm00001d012371_P001	Maize	golgi, vacuole	36.17	24.64
Zm00001d012377_P001	Maize	vacuole	36.17	24.64
Os08t0442200-01	Rice	extracellular	36.6	24.57
OQU76676	Sorghum	extracellular, golgi, vacuole	36.17	24.57
EES01841	Sorghum	vacuole	36.17	24.5
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	30.21	24.4
KXG39404	Sorghum	golgi, vacuole	35.32	24.34
OQU79673	Sorghum	vacuole	35.32	24.27
TraesCS2B01G092900.1	Wheat	golgi, vacuole	35.32	24.27
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	14.04	24.26
TraesCS2A01G078000.1	Wheat	vacuole	35.32	24.2
TraesCS2B01G093000.1	Wheat	golgi, vacuole	35.32	24.2
TraesCS2D01G076400.1	Wheat	vacuole	35.32	24.2
TraesCSU01G189700.1	Wheat	vacuole	35.32	24.2
TraesCS2B01G281700.1	Wheat	golgi, vacuole	35.32	24.13
HORVU3Hr1G109810.1	Barley	golgi, vacuole	35.74	24.07
Bra000222.1-P	Field mustard	cytosol	35.32	24.06
TraesCS3A01G496700.1	Wheat	golgi, vacuole	35.32	24.06
TraesCS7D01G075900.1	Wheat	vacuole	35.32	24.06
OQU87434	Sorghum	golgi, vacuole	36.17	24.01
TraesCS5A01G188200.1	Wheat	vacuole	37.02	23.97
TraesCS2D01G076000.1	Wheat	golgi, vacuole	34.89	23.91
TraesCS5B01G195400.1	Wheat	vacuole	37.02	23.9
TraesCS3D01G504000.1	Wheat	vacuole	34.89	23.77
HORVU2Hr1G012970.2	Barley	mitochondrion	35.32	23.71
EER96672	Sorghum	vacuole	36.6	23.5
TraesCS1A01G026500.1	Wheat	vacuole	34.47	23.48
Os06t0623700-01	Rice	golgi, vacuole	34.89	23.43
TraesCS3A01G496900.1	Wheat	vacuole	34.89	23.43
TraesCS5D01G202800.1	Wheat	golgi, vacuole	36.17	23.35
EES17427	Sorghum	golgi, vacuole	34.04	23.32
TraesCS7D01G076300.1	Wheat	vacuole	35.74	23.27
TraesCS3B01G559100.1	Wheat	vacuole	34.04	23.19
TraesCSU01G223800.1	Wheat	vacuole	34.04	23.19
TraesCS7D01G076000.1	Wheat	vacuole	33.62	23.17
HORVU7Hr1G028550.2	Barley	plastid	17.45	23.03
Zm00001d029108_P001	Maize	vacuole	31.06	23.03
TraesCS7D01G140500.1	Wheat	golgi, vacuole	33.62	22.9
HORVU5Hr1G058940.2	Barley	vacuole	35.74	22.89
TraesCS2D01G076300.1	Wheat	vacuole	33.62	22.83
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	37.02	22.77
TraesCS7B01G040900.1	Wheat	golgi, vacuole	33.62	22.7
TraesCS7D01G139900.1	Wheat	vacuole	33.19	22.41
TraesCS7D01G140000.1	Wheat	golgi, vacuole	33.19	22.41
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	33.62	22.19
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	34.89	21.93
HORVU7Hr1G028580.1	Barley	golgi, vacuole	32.77	21.88
Bra004613.1-P	Field mustard	vacuole	34.89	21.87
TraesCS7B01G040400.1	Wheat	golgi, vacuole	32.34	21.84
TraesCSU01G104000.1	Wheat	golgi, vacuole	32.34	21.84
Bra004614.1-P	Field mustard	vacuole	34.04	21.68
Bra000223.1-P	Field mustard	vacuole	33.62	21.41
EES17425	Sorghum	extracellular	23.83	21.37
TraesCS7A01G138800.1	Wheat	golgi, vacuole	27.66	21.31
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	31.06	21.1
Bra002383.1-P	Field mustard	vacuole	35.32	21.01
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	34.04	21.0
PGSC0003DMT400063282	Potato	extracellular, vacuole	13.62	20.65
Bra003263.1-P	Field mustard	vacuole	32.34	20.54
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	26.38	20.2
HORVU5Hr1G078340.1	Barley	golgi, vacuole	20.85	20.08
Bra007293.1-P	Field mustard	vacuole	31.49	20.05
Bra034344.1-P	Field mustard	vacuole	31.49	20.0
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	31.06	19.73
Bra014536.1-P	Field mustard	vacuole	34.04	19.32
Bra007457.1-P	Field mustard	golgi, vacuole	33.19	18.89
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	15.74	17.96
Bra038899.1-P	Field mustard	golgi, vacuole	26.38	16.71
Bra038898.1-P	Field mustard	golgi, vacuole	25.96	15.37
Bra036798.1-P	Field mustard	vacuole	26.81	15.22
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	9.36	15.07
Zm00001d012373_P001	Maize	vacuole	36.17	14.46
HORVU4Hr1G016850.1	Barley	cytosol	6.38	8.62

Protein Annotations

EnsemblPlants:Bra008125.1	EnsemblPlants:Bra008125.1-P	EnsemblPlantsGene:Bra008125	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF59	PFAM:PF03088	SUPFAM:SSF63829
UniParc:UPI0002545789	UniProt:M4CV79	MapMan:50.4.3	:	:	:

Description

AT1G74000 (E=2e-113) SS3 | SS3 (STRICTOSIDINE SYNTHASE 3); strictosidine synthase

Coordinates

chrA02:-:13259220..13260389

Molecular Weight (calculated)

24596.1 Da

IEP (calculated)

9.010

GRAVY (calculated)

-0.033

Length

235 amino acids

Sequence
(BLAST)

001: MSKCGRPAGI AFNNKTGELY VADAPLGLHV IPSGGGYAKK IADSADGKPF LFLDGLDVDP TTGVVYFTSF SSKFSPGDVL KAVASKDASG KLFKYDPSKR
101: VVTVLLEGLS GSAGCAVSSD GSFVLVSQFT KSNIKRYWIK GSKAGTSEDF TNAVSNPDNI KRIGSSGNFW VASVVNTATG PTNPSAVKIN SDGRVLQTIS
201: VKDKFGDTLV SEVNEFEGRL YVGTLSGPFA GIIDL

Best Arabidopsis Sequence Match ( AT1G74000.1 )
(BLAST)

001: MMRSFVSLIS LLLLLSFSSS VLSTKKSSFQ KLPVPGNRTG PEAFAFDSTG KGFYTGVTGG KILKYLPKKG YVDFAQITNS SKSSLCDGAL GTTNVEKCGR
101: PAGIAFNTKT GDLYVADAAL GLHVIPRRGG LAKKIADSVG GKPFLFLDGL DVDPTTGVVY FTSFSSTFGP RDVLKAVATK DSTGKFFKYD PSKKVVTVLM
201: EGLSGSAGCA VSSDGSFVLV GQFTKSNIKR YWIKGSKAGT SEDFTNSVSN PDNIKRIGST GNFWVASVVN SATGPTNPSA VKVSSAGKVL QTIPLKDKFG
301: DTLVSEVNEY KGQLYIGALF GPFAGILKL

Arabidopsis Description

SSL11Protein STRICTOSIDINE SYNTHASE-LIKE 11 [Source:UniProtKB/Swiss-Prot;Acc:P92976]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.