Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU76676 | Sorghum | extracellular, golgi, vacuole | 65.43 | 66.19 |
| Os07t0543600-00 | Rice | golgi, vacuole | 63.14 | 63.14 |
| GSMUA_Achr3P06240_001 | Banana | cytosol, mitochondrion, peroxisome, vacuole | 43.43 | 49.03 |
| Os01t0698200-00 | Rice | mitochondrion | 39.71 | 47.93 |
| Os08t0442200-01 | Rice | extracellular | 45.71 | 45.71 |
| Os08t0175000-00 | Rice | golgi, mitochondrion, vacuole | 46.0 | 45.22 |
| GSMUA_Achr5P05340_001 | Banana | vacuole | 45.14 | 44.01 |
| Os09t0374900-00 | Rice | cytosol, golgi, plastid, vacuole | 45.43 | 41.62 |
| VIT_13s0074g00070.t01 | Wine grape | vacuole | 32.29 | 41.24 |
| VIT_10s0042g00030.t01 | Wine grape | vacuole | 30.86 | 39.56 |
| VIT_00s0575g00010.t01 | Wine grape | vacuole | 34.86 | 39.1 |
| VIT_10s0042g00010.t01 | Wine grape | vacuole | 35.14 | 39.05 |
| VIT_10s0071g00020.t01 | Wine grape | vacuole | 34.29 | 38.84 |
| VIT_13s0074g00080.t01 | Wine grape | vacuole | 35.71 | 38.82 |
| VIT_10s0042g00020.t01 | Wine grape | vacuole | 35.43 | 38.51 |
| PGSC0003DMT400056839 | Potato | vacuole | 34.0 | 38.14 |
| VIT_10s0042g00050.t01 | Wine grape | vacuole | 34.86 | 37.89 |
| VIT_00s0575g00020.t01 | Wine grape | vacuole | 34.57 | 37.58 |
| VIT_17s0000g04580.t01 | Wine grape | extracellular, vacuole | 19.43 | 37.57 |
| VIT_10s0071g00010.t01 | Wine grape | vacuole | 34.29 | 37.27 |
| KRH07462 | Soybean | vacuole | 36.29 | 36.6 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 16.0 | 36.13 |
| KRH45407 | Soybean | nucleus | 35.71 | 35.82 |
| VIT_17s0000g04600.t01 | Wine grape | vacuole | 34.86 | 35.57 |
| Bra008125.1-P | Field mustard | cytosol, peroxisome, vacuole | 23.43 | 34.89 |
| Solyc12g039070.1.1 | Tomato | nucleus | 33.14 | 34.83 |
| CDX96505 | Canola | vacuole | 32.57 | 34.76 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 27.43 | 34.66 |
| VIT_10s0071g00250.t01 | Wine grape | vacuole | 33.43 | 34.41 |
| CDX73037 | Canola | vacuole | 32.0 | 34.15 |
| PGSC0003DMT400063277 | Potato | vacuole | 32.29 | 34.04 |
| Solyc03g114550.1.1 | Tomato | vacuole | 26.57 | 33.94 |
| Solyc03g114560.2.1 | Tomato | extracellular | 31.43 | 33.64 |
| Solyc03g114530.2.1 | Tomato | vacuole | 31.71 | 33.43 |
| KRH03206 | Soybean | vacuole | 32.0 | 33.33 |
| CDY47728 | Canola | vacuole | 31.14 | 33.33 |
| Bra003820.1-P | Field mustard | vacuole | 30.57 | 33.13 |
| Os03t0750700-01 | Rice | plasma membrane | 37.71 | 33.08 |
| Bra008126.1-P | Field mustard | vacuole | 30.86 | 33.03 |
| KRH54773 | Soybean | vacuole | 31.71 | 32.94 |
| Bra008127.1-P | Field mustard | vacuole | 30.86 | 32.93 |
| AT1G74010.1 | Thale cress | vacuole | 30.57 | 32.92 |
| KRH56734 | Soybean | vacuole | 32.0 | 32.75 |
| PGSC0003DMT400063274 | Potato | vacuole | 31.14 | 32.44 |
| Solyc03g114540.1.1 | Tomato | vacuole | 31.14 | 32.44 |
| CDX96506 | Canola | vacuole | 30.0 | 32.31 |
| CDY45861 | Canola | vacuole | 30.29 | 32.12 |
| PGSC0003DMT400063286 | Potato | vacuole | 30.57 | 32.04 |
| CDY47729 | Canola | vacuole | 29.71 | 32.0 |
| CDX73038 | Canola | vacuole | 29.71 | 32.0 |
| AT1G74000.1 | Thale cress | vacuole | 30.0 | 31.91 |
| CDY66188 | Canola | vacuole | 29.71 | 31.71 |
| Bra008124.1-P | Field mustard | vacuole | 29.43 | 31.69 |
| CDY66189 | Canola | vacuole | 26.86 | 31.65 |
| Bra015943.1-P | Field mustard | vacuole | 29.43 | 31.6 |
| CDX96507 | Canola | vacuole | 29.43 | 31.6 |
| CDX68204 | Canola | vacuole | 29.43 | 31.4 |
| CDY45863 | Canola | vacuole | 29.14 | 31.38 |
| CDX73039 | Canola | vacuole | 29.14 | 31.29 |
| AT1G74020.1 | Thale cress | vacuole | 29.71 | 31.04 |
| VIT_17s0000g04610.t01 | Wine grape | vacuole | 32.29 | 30.79 |
| Os03t0263600-01 | Rice | cytosol, golgi, mitochondrion, vacuole | 36.86 | 30.21 |
| Os12t0138800-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 35.71 | 29.07 |
| Os10t0543500-01 | Rice | plasma membrane | 21.14 | 29.02 |
| VIT_17s0000g04590.t01 | Wine grape | endoplasmic reticulum, peroxisome, vacuole | 34.86 | 26.93 |
| KRH63133 | Soybean | peroxisome, vacuole | 13.14 | 26.59 |
| Os07t0614000-02 | Rice | vacuole | 25.71 | 24.52 |
| Os11t0142300-00 | Rice | extracellular, plasma membrane | 7.43 | 23.21 |
| Os11t0142400-01 | Rice | extracellular | 6.0 | 23.08 |
| Bra015944.1-P | Field mustard | vacuole | 29.43 | 17.25 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | ProteinID:BAD35676.1 | ProteinID:BAN15820.1 | ProteinID:BAS98682.1 |
| ProteinID:EAZ37683.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | InterPro:IPR011042 | EnsemblPlantsGene:Os06g0623700 | EnsemblPlants:Os06t0623700-01 |
| PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF28 | UniProt:Q69U01 | SUPFAM:SSF63829 | SignalP:SignalP-noTM |
| InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI000040387B | SEG:seg | : |
Description
TOTAL GRAIN WEIGHT6Protein with indole-3-acetic acid (IAA)-glucose hydrolase activity, Regulation of grain length and weight (Os06t0623700-01)
Coordinates
chr6:+:25093242..25094294
Molecular Weight (calculated)
38170.8 Da
IEP (calculated)
10.080
GRAVY (calculated)
-0.367
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSTARQAAT AAAFALIVFL VLLSPSPTAA ATATTRMFKT IDARRSQHLD LGGSLVGPES VAFDGKGRGP YSGVSDGRIM RWNGEAAGWS TYTYSPSYTK
101: NKCAASTLPT VQTESKCGRP LGLRFHYKTG NLYIADAYMG LMRVGPKGGE ATVLAMKADG VPLRFTNGVD IDQVTGDVYF TDSSMNYQRS QHEQVTATKD
201: STGRLMKYDP RTNQVTVLQS NITYPNGVAM SADRTHLIVA LTGPCKLMRH WIRGPKTGKS EPFVDLPGYP DNVRPDGKGG YWIALHREKY ELPFGPDSHL
301: VAMRVSAGGK LVQQMRGPKS LRPTEVMERK DGKIYMGNVE LPYVGVVKSS
101: NKCAASTLPT VQTESKCGRP LGLRFHYKTG NLYIADAYMG LMRVGPKGGE ATVLAMKADG VPLRFTNGVD IDQVTGDVYF TDSSMNYQRS QHEQVTATKD
201: STGRLMKYDP RTNQVTVLQS NITYPNGVAM SADRTHLIVA LTGPCKLMRH WIRGPKTGKS EPFVDLPGYP DNVRPDGKGG YWIALHREKY ELPFGPDSHL
301: VAMRVSAGGK LVQQMRGPKS LRPTEVMERK DGKIYMGNVE LPYVGVVKSS
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.