Factsheet for Os08t0442200-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

extracellular: 19038476
extracellular: 19226311

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029115_P001	Maize	extracellular, vacuole	46.29	69.23
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	69.14	67.98
TraesCS2B01G093000.1	Wheat	golgi, vacuole	66.0	67.35
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	26.0	66.91
TraesCS2B01G092900.1	Wheat	golgi, vacuole	65.14	66.67
HORVU6Hr1G026020.1	Barley	cytosol	47.14	66.53
TraesCSU01G189700.1	Wheat	vacuole	64.86	66.18
TraesCS2D01G076400.1	Wheat	vacuole	64.86	66.18
TraesCS2D01G076000.1	Wheat	golgi, vacuole	64.86	66.18
TraesCS2D01G076200.1	Wheat	vacuole	64.57	65.89
TraesCS2A01G078000.1	Wheat	vacuole	64.57	65.89
Zm00001d029108_P001	Maize	vacuole	58.29	64.35
Zm00001d029117_P001	Maize	vacuole	62.0	64.2
Zm00001d029111_P001	Maize	vacuole	62.0	64.2
OQU75879	Sorghum	vacuole	56.0	64.05
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	53.14	63.92
HORVU2Hr1G012970.2	Barley	mitochondrion	63.71	63.71
KXG39404	Sorghum	golgi, vacuole	62.0	63.64
TraesCS2D01G076300.1	Wheat	vacuole	61.71	62.43
Os01t0698200-00	Rice	mitochondrion	51.43	62.07
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.14	48.71
Os06t0623700-01	Rice	golgi, vacuole	45.71	45.71
Os07t0543600-00	Rice	golgi, vacuole	45.71	45.71
GSMUA_Achr5P05340_001	Banana	vacuole	46.29	45.13
VIT_10s0042g00010.t01	Wine grape	vacuole	40.29	44.76
VIT_00s0575g00010.t01	Wine grape	vacuole	39.14	43.91
VIT_13s0074g00070.t01	Wine grape	vacuole	34.29	43.8
VIT_10s0071g00020.t01	Wine grape	vacuole	38.57	43.69
VIT_10s0042g00050.t01	Wine grape	vacuole	39.71	43.17
VIT_00s0575g00020.t01	Wine grape	vacuole	39.71	43.17
VIT_10s0042g00020.t01	Wine grape	vacuole	39.43	42.86
VIT_13s0074g00080.t01	Wine grape	vacuole	39.14	42.55
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	46.29	42.41
VIT_10s0071g00010.t01	Wine grape	vacuole	38.86	42.24
VIT_10s0042g00030.t01	Wine grape	vacuole	32.0	41.03
VIT_10s0071g00250.t01	Wine grape	vacuole	38.57	39.71
VIT_17s0000g04600.t01	Wine grape	vacuole	38.0	38.78
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.0	38.67
PGSC0003DMT400056839	Potato	vacuole	33.43	37.5
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.57	36.6
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.0	36.13
KRH07462	Soybean	vacuole	35.43	35.73
CDX73037	Canola	vacuole	33.43	35.67
KRH54773	Soybean	vacuole	34.29	35.61
Bra003820.1-P	Field mustard	vacuole	32.86	35.6
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	27.71	35.02
Solyc12g039070.1.1	Tomato	nucleus	33.14	34.83
PGSC0003DMT400063274	Potato	vacuole	33.43	34.82
CDX96505	Canola	vacuole	32.57	34.76
Solyc03g114550.1.1	Tomato	vacuole	27.14	34.67
Solyc03g114560.2.1	Tomato	extracellular	32.29	34.56
KRH45407	Soybean	nucleus	34.29	34.38
Os03t0750700-01	Rice	plasma membrane	39.14	34.34
CDY66189	Canola	vacuole	28.86	34.01
AT1G74010.1	Thale cress	vacuole	31.43	33.85
PGSC0003DMT400063286	Potato	vacuole	32.29	33.83
CDX68204	Canola	vacuole	31.43	33.54
CDY66188	Canola	vacuole	31.43	33.54
Bra008127.1-P	Field mustard	vacuole	31.43	33.54
Solyc03g114540.1.1	Tomato	vacuole	32.0	33.33
CDY45861	Canola	vacuole	31.14	33.03
CDY47728	Canola	vacuole	30.86	33.03
Bra008126.1-P	Field mustard	vacuole	30.86	33.03
PGSC0003DMT400063277	Potato	vacuole	31.14	32.83
KRH03206	Soybean	vacuole	31.43	32.74
CDX73038	Canola	vacuole	30.29	32.62
CDX96506	Canola	vacuole	30.0	32.31
Bra008124.1-P	Field mustard	vacuole	30.0	32.31
CDY47729	Canola	vacuole	30.0	32.31
AT1G74020.1	Thale cress	vacuole	30.86	32.24
Solyc03g114530.2.1	Tomato	vacuole	30.57	32.23
KRH56734	Soybean	vacuole	31.43	32.16
CDY45863	Canola	vacuole	29.71	32.0
VIT_17s0000g04610.t01	Wine grape	vacuole	33.43	31.88
AT1G74000.1	Thale cress	vacuole	29.71	31.61
Bra015943.1-P	Field mustard	vacuole	29.43	31.6
CDX96507	Canola	vacuole	29.43	31.6
CDX73039	Canola	vacuole	29.14	31.29
Os03t0263600-01	Rice	cytosol, golgi, mitochondrion, vacuole	37.71	30.91
KRH63133	Soybean	peroxisome, vacuole	14.86	30.06
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	36.29	29.53
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	37.43	28.92
Os10t0543500-01	Rice	plasma membrane	20.57	28.24
Os07t0614000-02	Rice	vacuole	27.14	25.89
Os11t0142300-00	Rice	extracellular, plasma membrane	7.14	22.32
Os11t0142400-01	Rice	extracellular	5.43	20.88
Bra015944.1-P	Field mustard	vacuole	29.43	17.25

Protein Annotations

Gene3D:2.120.10.30	EntrezGene:4345695	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EMBL:AK073494	ProteinID:BAD09923.1
ProteinID:BAD10027.1	ProteinID:BAF23829.1	ProteinID:BAT05638.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042
EnsemblPlantsGene:Os08g0442200	EnsemblPlants:Os08t0442200-01	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	UniProt:Q6Z8S2
SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI000023AF78	RefSeq:XP_015649589.1
SEG:seg	:	:	:	:	:

Description

Six-bladed beta-propeller, TolB-like domain containing protein. (Os08t0442200-01);Similar to strictosidine synthase 1. (Os08t0442200-02)

Coordinates

chr8:-:21549721..21551326

Molecular Weight (calculated)

38041.9 Da

IEP (calculated)

8.100

GRAVY (calculated)

-0.255

Length

350 amino acids

Sequence
(BLAST)

001: MASFSTVFLL LSLVCLASPC AAQRVICEAP PCTTASQVKT TPTNRASHVR LPEGVTGAES LAFDSSNRGP FTGVSDGRVL KWGGDSAGWT TFAYNRNYRS
101: NPTCASSSEE TESTCGRPLG LAFHLKTGIL YFADAYKGLM RVGPRGGQAD VLATEADGVP FNYLNGVDVD QDTGDVYFTD SSTTITRRYQ ENIMRNRDAT
201: ARLMKYDAKT KQVTVLKDRL PYANGVAVSH DGRYLVVAHT GPAQVFRYWL KGAKAGQYEL FADLPGYPDN VRRDAKGGYW VGLNREKITF NVPAAASPAK
301: HLVGVRLNGD GVEVEELTAA SRAVTLSEVV ERDRKLWLGS VDLDYVGLLQ

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.