Factsheet for VIT_10s0042g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0071g00020.t01	Wine grape	vacuole	93.17	97.09
VIT_00s0575g00010.t01	Wine grape	vacuole	93.48	96.47
VIT_10s0042g00010.t01	Wine grape	vacuole	91.3	93.33
VIT_13s0074g00070.t01	Wine grape	vacuole	78.88	92.7
VIT_10s0042g00030.t01	Wine grape	vacuole	77.95	91.94
VIT_00s0575g00020.t01	Wine grape	vacuole	91.61	91.61
VIT_10s0042g00050.t01	Wine grape	vacuole	91.61	91.61
VIT_10s0071g00010.t01	Wine grape	vacuole	91.61	91.61
VIT_13s0074g00080.t01	Wine grape	vacuole	90.99	90.99
VIT_10s0071g00250.t01	Wine grape	vacuole	58.07	55.0
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	46.89	48.71
KRH45407	Soybean	nucleus	52.48	48.42
KRH07462	Soybean	vacuole	51.55	47.84
Zm00001d029115_P001	Maize	extracellular, vacuole	33.85	46.58
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	25.16	44.75
TraesCS3B01G289800.1	Wheat	vacuole	46.27	44.35
HORVU3Hr1G065520.3	Barley	extracellular	44.1	44.1
TraesCS5B01G382800.1	Wheat	vacuole	45.96	43.4
TraesCS5B01G383000.1	Wheat	vacuole	45.65	43.36
TraesCS3A01G256600.1	Wheat	vacuole	45.03	43.15
OQU75879	Sorghum	vacuole	40.68	42.81
HORVU6Hr1G026020.1	Barley	cytosol	32.92	42.74
TraesCS2D01G076200.1	Wheat	vacuole	45.34	42.57
KXG39404	Sorghum	golgi, vacuole	45.03	42.52
TraesCS2B01G092900.1	Wheat	golgi, vacuole	45.03	42.4
Zm00001d029111_P001	Maize	vacuole	44.41	42.31
Zm00001d029117_P001	Maize	vacuole	44.41	42.31
TraesCS2B01G093000.1	Wheat	golgi, vacuole	45.03	42.27
Zm00001d029108_P001	Maize	vacuole	41.61	42.27
HORVU5Hr1G093840.1	Barley	vacuole	44.41	42.18
TraesCS2A01G078000.1	Wheat	vacuole	44.72	41.98
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	37.89	41.92
GSMUA_Achr5P05340_001	Banana	vacuole	46.58	41.78
HORVU2Hr1G012970.2	Barley	mitochondrion	45.34	41.71
TraesCS2D01G076000.1	Wheat	golgi, vacuole	44.41	41.69
TraesCS2D01G076400.1	Wheat	vacuole	44.41	41.69
TraesCSU01G189700.1	Wheat	vacuole	44.41	41.69
TraesCS5D01G389100.1	Wheat	plastid, vacuole	45.65	41.41
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	45.65	41.18
EES17427	Sorghum	golgi, vacuole	43.79	41.11
TraesCS5D01G202700.1	Wheat	vacuole	44.1	41.04
VIT_17s0000g04600.t01	Wine grape	vacuole	43.48	40.82
TraesCS2D01G076300.1	Wheat	vacuole	43.79	40.75
EES01763	Sorghum	vacuole	43.48	40.58
Zm00001d012249_P001	Maize	vacuole	43.48	40.58
Zm00001d012252_P001	Maize	vacuole	43.48	40.58
Zm00001d012366_P001	Maize	vacuole	43.17	40.29
Zm00001d012368_P001	Maize	golgi, vacuole	43.17	40.29
Zm00001d012371_P001	Maize	golgi, vacuole	43.17	40.29
Zm00001d012377_P001	Maize	vacuole	43.17	40.29
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	43.17	40.17
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.17	40.17
EER96671	Sorghum	endoplasmic reticulum, golgi	43.48	40.0
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	45.96	40.0
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	42.55	39.94
EES01841	Sorghum	vacuole	42.86	39.77
Os01t0698200-00	Rice	mitochondrion	35.71	39.66
VIT_06s0009g00850.t01	Wine grape	cytosol	43.17	39.6
OQU79673	Sorghum	vacuole	41.93	39.47
Os08t0442200-01	Rice	extracellular	42.86	39.43
TraesCS3D01G503900.1	Wheat	nucleus	37.89	39.23
TraesCS3B01G559000.1	Wheat	cytosol	22.67	39.04
VIT_17s0000g04610.t01	Wine grape	vacuole	44.41	38.96
TraesCS3A01G496700.1	Wheat	golgi, vacuole	41.61	38.84
Zm00001d012375_P001	Maize	vacuole	40.37	38.81
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	42.86	38.76
TraesCS3D01G504000.1	Wheat	vacuole	41.3	38.55
TraesCS3A01G298200.1	Wheat	cytosol	37.89	38.49
VIT_08s0007g05360.t01	Wine grape	vacuole	45.03	38.36
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	17.39	38.36
TraesCS3B01G559100.1	Wheat	vacuole	40.99	38.26
OQU87434	Sorghum	golgi, vacuole	41.93	38.14
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	18.94	37.89
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	24.22	37.86
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	21.74	37.84
TraesCS3D01G303900.1	Wheat	cytosol	37.58	37.81
TraesCS3A01G496900.1	Wheat	vacuole	40.99	37.71
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	29.5	37.4
TraesCS3B01G558800.1	Wheat	cytosol	24.22	37.32
TraesCS7D01G076300.1	Wheat	vacuole	41.61	37.12
TraesCS7D01G075900.1	Wheat	vacuole	39.75	37.1
TraesCS1A01G026500.1	Wheat	vacuole	39.44	36.81
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	39.13	36.73
HORVU3Hr1G109810.1	Barley	golgi, vacuole	39.75	36.68
TraesCS7D01G076000.1	Wheat	vacuole	38.82	36.66
TraesCSU01G223800.1	Wheat	vacuole	39.13	36.52
TraesCSU01G240600.1	Wheat	cytosol	21.43	36.51
TraesCSU01G255900.1	Wheat	cytosol	21.43	36.51
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	42.55	36.34
EER96672	Sorghum	vacuole	41.3	36.34
TraesCS2B01G281700.1	Wheat	golgi, vacuole	38.82	36.34
TraesCS5B01G195400.1	Wheat	vacuole	40.99	36.26
TraesCS5D01G202800.1	Wheat	golgi, vacuole	40.99	36.26
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	15.22	36.03
TraesCS7A01G138300.1	Wheat	cytosol	23.29	35.89
TraesCS7A01G138700.1	Wheat	cytosol	23.29	35.89
TraesCS7D01G076600.1	Wheat	cytosol	23.29	35.89
TraesCS5A01G188200.1	Wheat	vacuole	40.37	35.81
TraesCS7D01G076500.1	Wheat	cytosol	21.12	35.79
Os07t0543600-00	Rice	golgi, vacuole	38.82	35.71
HORVU5Hr1G078340.1	Barley	golgi, vacuole	27.02	35.66
TraesCS7B01G040900.1	Wheat	golgi, vacuole	38.51	35.63
Os06t0623700-01	Rice	golgi, vacuole	38.51	35.43
HORVU7Hr1G028550.2	Barley	plastid	19.57	35.39
TraesCS7B01G040400.1	Wheat	golgi, vacuole	38.2	35.34
HORVU5Hr1G058940.2	Barley	vacuole	40.06	35.15
TraesCS7D01G139900.1	Wheat	vacuole	37.89	35.06
EES07680	Sorghum	golgi, vacuole	37.58	34.97
EES05427	Sorghum	vacuole	37.27	34.88
TraesCS7D01G140000.1	Wheat	golgi, vacuole	37.58	34.77
EER90208	Sorghum	vacuole	37.27	34.68
EES05895	Sorghum	golgi, vacuole	37.27	34.68
OQU85880	Sorghum	golgi, vacuole	37.27	34.68
TraesCS7D01G140500.1	Wheat	golgi, vacuole	36.96	34.49
OQU76676	Sorghum	extracellular, golgi, vacuole	36.96	34.39
HORVU7Hr1G028580.1	Barley	golgi, vacuole	37.58	34.38
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	40.68	34.29
EES17425	Sorghum	extracellular	27.64	33.97
TraesCSU01G104000.1	Wheat	golgi, vacuole	36.34	33.62
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	36.96	33.43
TraesCS1A01G437900.1	Wheat	cytosol	19.25	33.33
TraesCS7A01G138800.1	Wheat	golgi, vacuole	31.06	32.79
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	45.96	32.67
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	37.58	32.35
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	34.47	32.08
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	40.37	32.02
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	29.81	31.27
VIT_04s0210g00060.t01	Wine grape	cytosol, mitochondrion	23.29	27.88
HORVU4Hr1G016850.1	Barley	cytosol	14.91	27.59
VIT_04s0210g00130.t01	Wine grape	plasma membrane, vacuole	22.05	24.83
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	27.33	24.11
VIT_04s0210g00090.t01	Wine grape	mitochondrion, vacuole	14.6	23.98
Zm00001d012373_P001	Maize	vacuole	42.86	23.47
VIT_11s0016g00880.t01	Wine grape	plastid	26.71	23.37
VIT_04s0210g00120.t01	Wine grape	vacuole	27.02	22.96
VIT_04s0210g00080.t01	Wine grape	vacuole	26.71	22.69
VIT_04s0210g00050.t01	Wine grape	plastid	27.95	21.58
VIT_04s0210g00100.t01	Wine grape	cytosol	11.18	20.57
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	26.4	18.44
VIT_04s0210g00040.t01	Wine grape	cytosol, peroxisome, vacuole	21.12	18.13
VIT_04s0210g00030.t01	Wine grape	vacuole	27.64	11.51

Protein Annotations

EntrezGene:100247277	wikigene:100247277	EntrezGene:100248157	wikigene:100248157	Gene3D:2.120.10.30	MapMan:50.4.3
InterPro:6-blade_b-propeller_TolB-like	ProteinID:CBI28988	ProteinID:CBI28988.3	UniProt:D7TER5	EMBL:FN595766	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016787	GO:GO:0016788
GO:GO:0016844	InterPro:IPR011042	EntrezGene:LOC100247277	wikigene:LOC100247277	EntrezGene:LOC100248157	wikigene:LOC100248157
PFAM:PF03088	PFscan:PS51257	PANTHER:PTHR10426	PANTHER:PTHR10426:SF33	SUPFAM:SSF63829	SignalP:SignalP-noTM
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI0001BE3098	ArrayExpress:VIT_10s0042g00020	EnsemblPlantsGene:VIT_10s0042g00020	EnsemblPlants:VIT_10s0042g00020.t01
RefSeq:XP_002275622	RefSeq:XP_002275622.2	RefSeq:XP_019078101.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:+:12691489..12692838

Molecular Weight (calculated)

35716.9 Da

IEP (calculated)

7.268

GRAVY (calculated)

-0.057

Length

322 amino acids

Sequence
(BLAST)

001: MKLSQFFIFS FISISLFGCV NSHQALKYNT LELPSGVSGP ESIAFDCNGD GPYTGISDGK ILKWQGSKHG WKEFAITSPF RIPKFCDGSL NPAMEQVCGR
101: PLGLKFNEAT CDLYIADAYF GLLVVGQNGG VAKQVAISAE GVPFRFTNAL DIDQNTGVVY FTDTSTIFQR WAYAIVMQIG DKTGRLLKYD PRTKEVTVLL
201: RGLSFSNGVA LSEDKYFVLV TEMTAAKITR YWLQGQKSQL SDTFTQLVGC PDNIQRNIHG EFWVAQNNCG RPEVKVRPVR LNKEGKIVEE LSVDVGPLSE
301: VQEKNNSLWL GYVILSYIGV LN

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.