Factsheet for VIT_11s0016g00880.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
vacuole 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	80.43	81.1
PGSC0003DMT400005990	Potato	cytosol	54.89	69.9
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	83.15	66.38
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	62.23	64.69
KRH37504	Soybean	vacuole	61.68	63.41
KRH37503	Soybean	vacuole	50.82	59.55
GSMUA_Achr11P...	Banana	golgi, vacuole	56.25	57.66
TraesCS2A01G170300.1	Wheat	cytosol	45.92	52.81
TraesCS2B01G196600.1	Wheat	golgi	49.46	49.86
KXG36676	Sorghum	vacuole	48.37	49.44
TraesCS2D01G177900.2	Wheat	golgi	48.64	49.04
TraesCS2B01G196500.1	Wheat	golgi, vacuole	47.83	47.96
KXG36678	Sorghum	vacuole	47.83	47.83
Zm00001d006853_P001	Maize	vacuole	47.01	47.14
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	47.01	47.14
Os07t0614000-02	Rice	vacuole	46.47	46.59
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	47.01	43.69
VIT_04s0210g00060.t01	Wine grape	cytosol, mitochondrion	26.09	35.69
VIT_04s0210g00120.t01	Wine grape	vacuole	32.88	31.93
VIT_04s0210g00080.t01	Wine grape	vacuole	32.61	31.66
VIT_04s0210g00100.t01	Wine grape	cytosol	14.67	30.86
VIT_06s0009g00850.t01	Wine grape	cytosol	29.08	30.48
VIT_04s0210g00130.t01	Wine grape	plasma membrane, vacuole	22.83	29.37
VIT_04s0210g00050.t01	Wine grape	plastid	33.15	29.26
VIT_04s0210g00090.t01	Wine grape	mitochondrion, vacuole	15.22	28.57
VIT_00s0575g00020.t01	Wine grape	vacuole	24.46	27.95
VIT_10s0042g00050.t01	Wine grape	vacuole	24.46	27.95
VIT_10s0042g00010.t01	Wine grape	vacuole	23.64	27.62
VIT_13s0074g00070.t01	Wine grape	vacuole	20.38	27.37
VIT_10s0071g00010.t01	Wine grape	vacuole	23.91	27.33
VIT_00s0575g00010.t01	Wine grape	vacuole	23.1	27.24
VIT_10s0042g00030.t01	Wine grape	vacuole	20.11	27.11
VIT_10s0042g00020.t01	Wine grape	vacuole	23.37	26.71
VIT_13s0074g00080.t01	Wine grape	vacuole	23.37	26.71
VIT_10s0071g00020.t01	Wine grape	vacuole	22.28	26.54
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	29.08	26.35
VIT_10s0071g00250.t01	Wine grape	vacuole	24.18	26.18
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	25.27	25.14
VIT_08s0007g05360.t01	Wine grape	vacuole	24.46	23.81
VIT_17s0000g04600.t01	Wine grape	vacuole	21.47	23.03
VIT_04s0210g00040.t01	Wine grape	cytosol, peroxisome, vacuole	21.74	21.33
VIT_17s0000g04610.t01	Wine grape	vacuole	20.92	20.98
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	9.24	18.78
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	20.65	16.78
VIT_04s0210g00030.t01	Wine grape	vacuole	33.42	15.91

Protein Annotations

EntrezGene:100254165	wikigene:100254165	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	ProteinID:CBI27793
ProteinID:CBI27793.3	UniProt:D7TCD5	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042
EntrezGene:LOC100254165	wikigene:LOC100254165	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF35	SUPFAM:SSF63829
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI00015C91F5	ArrayExpress:VIT_11s0016g00880	EnsemblPlantsGene:VIT_11s0016g00880	EnsemblPlants:VIT_11s0016g00880.t01
RefSeq:XP_002277807	RefSeq:XP_002277807.1	:	:	:	:

Description

No Description!

Coordinates

chr11:-:781787..784261

Molecular Weight (calculated)

40618.5 Da

IEP (calculated)

6.001

GRAVY (calculated)

-0.059

Length

368 amino acids

Sequence
(BLAST)

001: MAGNNGFRPS KQHLQTCSSF VLASILASTL QIYFFSPISP DPLHLPPVSA AINLPTNNKL QEVTKIGEGF LNKPEDLCFD EEGILYTATR DGWIKRLHRN
101: GSWEDWKLIG GYALLGITTA RAGGIFVCDA QKGLLKVGED GVSFLTSHVN GSEIRFADDV IEASDGSLYF SVASSKFGLH HWYLDLLEAK PHGQLLKYDP
201: LLNETSIILD NLAFPNGVAL SQDEDFLVVC ETWKFRCLKY WLKGERKGRT ETFIDNLPNG PDNINLAPDG SFWIALIKLA SDGFEFVHAS KALKHFLATF
301: PKLFQLVNGS NEKATVVKVA ADGKIVDKFD DPNGKVMSFV TSALEFEDHL YLGSLNTNFI GKLPLKAA

Best Arabidopsis Sequence Match ( AT3G51420.1 )
(BLAST)

001: MVLFFSTRFL FFSIFFPCLI SITLYQLDSF EPASLPADSL ITSPTSIPPL LNDRFLTGAE FIGVGLLNNP EDIAYHKDSN LIYTGCVDGW VKRVSVHDSA
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL

Arabidopsis Description

SSL4SSL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VDG6]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.