Factsheet for VIT_11s0016g00870.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g00880.t01	Wine grape	plastid	66.38	83.15
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	61.39	77.53
PGSC0003DMT400005990	Potato	cytosol	43.17	68.86
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	49.46	64.41
KRH37504	Soybean	vacuole	47.51	61.17
GSMUA_Achr11P...	Banana	golgi, vacuole	44.9	57.66
KRH37503	Soybean	vacuole	38.83	57.01
TraesCS2A01G170300.1	Wheat	cytosol	37.09	53.44
TraesCS2B01G196600.1	Wheat	golgi	39.7	50.14
TraesCS2D01G177900.2	Wheat	golgi	38.83	49.04
KXG36678	Sorghum	vacuole	38.83	48.64
KXG36676	Sorghum	vacuole	37.53	48.06
Zm00001d006853_P001	Maize	vacuole	38.18	47.96
TraesCS2B01G196500.1	Wheat	golgi, vacuole	37.96	47.68
Os07t0614000-02	Rice	vacuole	37.31	46.87
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	37.31	46.87
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	37.31	43.43
VIT_04s0210g00060.t01	Wine grape	cytosol, mitochondrion	21.48	36.8
VIT_04s0210g00100.t01	Wine grape	cytosol	12.36	32.57
VIT_04s0210g00120.t01	Wine grape	vacuole	26.68	32.45
VIT_04s0210g00080.t01	Wine grape	vacuole	26.46	32.19
VIT_06s0009g00850.t01	Wine grape	cytosol	23.64	31.05
VIT_04s0210g00050.t01	Wine grape	plastid	26.9	29.74
VIT_04s0210g00130.t01	Wine grape	plasma membrane, vacuole	18.0	29.02
VIT_04s0210g00090.t01	Wine grape	mitochondrion, vacuole	11.93	28.06
VIT_00s0575g00020.t01	Wine grape	vacuole	19.52	27.95
VIT_10s0042g00050.t01	Wine grape	vacuole	19.52	27.95
VIT_13s0074g00070.t01	Wine grape	vacuole	16.49	27.74
VIT_10s0042g00010.t01	Wine grape	vacuole	18.87	27.62
VIT_10s0042g00030.t01	Wine grape	vacuole	16.05	27.11
VIT_10s0071g00250.t01	Wine grape	vacuole	19.96	27.06
VIT_10s0071g00010.t01	Wine grape	vacuole	18.87	27.02
VIT_13s0074g00080.t01	Wine grape	vacuole	18.87	27.02
VIT_00s0575g00010.t01	Wine grape	vacuole	18.22	26.92
VIT_10s0042g00020.t01	Wine grape	vacuole	18.44	26.4
VIT_10s0071g00020.t01	Wine grape	vacuole	17.57	26.21
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	22.34	25.37
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	20.17	25.14
VIT_08s0007g05360.t01	Wine grape	vacuole	19.96	24.34
VIT_17s0000g04600.t01	Wine grape	vacuole	17.79	23.91
VIT_04s0210g00040.t01	Wine grape	cytosol, peroxisome, vacuole	18.0	22.13
VIT_17s0000g04610.t01	Wine grape	vacuole	17.14	21.53
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	7.38	18.78
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	17.57	17.88
VIT_04s0210g00030.t01	Wine grape	vacuole	27.98	16.69

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	ProteinID:CBI27792	ProteinID:CBI27792.3	UniProt:D7TCD4
EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF35	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
UniParc:UPI0001BE339C	ArrayExpress:VIT_11s0016g00870	EnsemblPlantsGene:VIT_11s0016g00870	EnsemblPlants:VIT_11s0016g00870.t01	SEG:seg	:

Description

No Description!

Coordinates

chr11:-:776027..781452

Molecular Weight (calculated)

51374.3 Da

IEP (calculated)

7.194

GRAVY (calculated)

0.037

Length

461 amino acids

Sequence
(BLAST)

001: MSNTTFLPQP LHIPILFYLL FLLLLPFINL HSHCPHKNKL FRVKLLDLRA EGLTLTNLLI FFSRYILYFE IPEPFTSLST LNQKRSLLIK PLAMTGNNGF
101: RPSKHCLQAC SSFALASTLA FTLQIYFFSP ISPDPLHLPH VSATLNYPTS NKLQEVAKIG EGLLDKPEDV CFDGEGILYT ATRDGWIKRL HRNGSWEDWR
201: LIGGDTLLGV TTTRTGGIVV CDTQKGLLKV GEDGVSLLTS HVNGSEIRFA DDVIEASDGS LYFSVASSKF GLHDWYLDVL EAKPHGQLLK YDPLLNETSI
301: LLDNLAFANG VALSQDEDFL VVCETWKFRC LKYWLKGERK GRTEVFVDNL PGGPDNINLA PDGSFWIALL ELSREGMGFV HTSKASKHLV ATFPKLLGLV
401: QGMQKKAMVV KVGADGKMMK RFNDPNGSVM SFVTNALEFE EHLYLGSLNT NFIGKLPLTT A

Best Arabidopsis Sequence Match ( AT3G51420.1 )
(BLAST)

001: MVLFFSTRFL FFSIFFPCLI SITLYQLDSF EPASLPADSL ITSPTSIPPL LNDRFLTGAE FIGVGLLNNP EDIAYHKDSN LIYTGCVDGW VKRVSVHDSA
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL

Arabidopsis Description

SSL4SSL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VDG6]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.