Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005990 | Potato | cytosol | 76.55 | 93.77 |
| VIT_11s0016g00880.t01 | Wine grape | plastid | 64.69 | 62.23 |
| VIT_11s0016g00860.t01 | Wine grape | golgi, vacuole | 62.43 | 60.55 |
| KRH37504 | Soybean | vacuole | 56.21 | 55.59 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 54.52 | 53.76 |
| KRH37503 | Soybean | vacuole | 46.89 | 52.87 |
| TraesCS2A01G170300.1 | Wheat | cytosol | 47.46 | 52.5 |
| VIT_11s0016g00870.t01 | Wine grape | plasma membrane, vacuole | 64.41 | 49.46 |
| TraesCS2B01G196600.1 | Wheat | golgi | 50.28 | 48.77 |
| TraesCS2D01G177900.2 | Wheat | golgi | 49.44 | 47.95 |
| TraesCS2B01G196500.1 | Wheat | golgi, vacuole | 48.31 | 46.59 |
| KXG36678 | Sorghum | vacuole | 48.31 | 46.47 |
| KXG36676 | Sorghum | vacuole | 46.89 | 46.11 |
| Zm00001d006853_P001 | Maize | vacuole | 47.74 | 46.05 |
| TraesCS2D01G177700.1 | Wheat | plasma membrane, vacuole | 46.89 | 45.23 |
| Os07t0614000-02 | Rice | vacuole | 46.89 | 45.23 |
| TraesCS2A01G170200.1 | Wheat | plasma membrane, vacuole | 46.89 | 41.92 |
| Solyc02g082900.2.1 | Tomato | vacuole | 34.18 | 32.61 |
| Solyc06g073910.2.1 | Tomato | cytosol, plasma membrane, vacuole | 24.01 | 27.96 |
| Solyc11g071800.1.1 | Tomato | plastid, vacuole | 28.81 | 26.09 |
| Solyc10g079610.1.1 | Tomato | vacuole | 26.55 | 25.27 |
| Solyc03g114560.2.1 | Tomato | extracellular | 22.03 | 23.85 |
| Solyc07g055740.1.1 | Tomato | vacuole | 23.45 | 23.65 |
| Solyc04g040090.2.1 | Tomato | vacuole | 25.14 | 23.61 |
| Solyc03g053130.2.1 | Tomato | extracellular | 27.4 | 23.43 |
| Solyc03g114540.1.1 | Tomato | vacuole | 22.03 | 23.21 |
| Solyc03g114530.2.1 | Tomato | vacuole | 21.47 | 22.89 |
| Solyc07g055750.2.1 | Tomato | golgi, plastid, vacuole | 25.42 | 22.33 |
| Solyc12g039070.1.1 | Tomato | nucleus | 20.06 | 21.32 |
| Solyc03g114550.1.1 | Tomato | vacuole | 15.54 | 20.07 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | InterPro:IPR011042 |
| UniProt:K4BZW9 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF35 | SUPFAM:SSF63829 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:Solyc05g025810.2 | EnsemblPlants:Solyc05g025810.2.1 | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI0002765CE1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:36887239..36890935
Molecular Weight (calculated)
39256.4 Da
IEP (calculated)
6.101
GRAVY (calculated)
0.099
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MLYFSFLMVI LVAIILQLVL FSPISPQILE IPSPSPTFTS NSYLQRVSKV GEGFVDRPED VAVDKMGVVY TATRDGWIKR MHKNGSWESW KYIGRDTLLG
101: LKVSSAGHII VCDAQEGLLK VTEDAVTVLA SHVNGEKIRL ADDVVEASDG SVYFSVASTK FGLHEWFLDV LEAKPHGQLL KYSPSLNQTS VIIDNLAFAN
201: GVALSADQDY LVVCESWKFR CQKYWLKDEM KGQTEIFIDN LVGAPDNIKL APDGSFWIAL VQVTAPRLNF IHKSRASKHL LATFPKLMKW VMGAYDKAMV
301: VNVAADGKIT KGFDDPNGKV MSFVTSVLEY DDHLYLGSLS CDFIGKLPLT TSTD
101: LKVSSAGHII VCDAQEGLLK VTEDAVTVLA SHVNGEKIRL ADDVVEASDG SVYFSVASTK FGLHEWFLDV LEAKPHGQLL KYSPSLNQTS VIIDNLAFAN
201: GVALSADQDY LVVCESWKFR CQKYWLKDEM KGQTEIFIDN LVGAPDNIKL APDGSFWIAL VQVTAPRLNF IHKSRASKHL LATFPKLMKW VMGAYDKAMV
301: VNVAADGKIT KGFDDPNGKV MSFVTSVLEY DDHLYLGSLS CDFIGKLPLT TSTD
001: MVLFFSTRFL FFSIFFPCLI SITLYQLDSF EPASLPADSL ITSPTSIPPL LNDRFLTGAE FIGVGLLNNP EDIAYHKDSN LIYTGCVDGW VKRVSVHDSA
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL
Arabidopsis Description
SSL4SSL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VDG6]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.