Factsheet for Solyc07g055750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, vacuole

Predictor Summary:

plastid 2
mitochondrion 2
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044685	Potato	extracellular	59.8	89.59
Solyc07g055740.1.1	Tomato	vacuole	65.26	74.93
Solyc10g079610.1.1	Tomato	vacuole	59.06	63.98
Solyc04g040090.2.1	Tomato	vacuole	59.8	63.93
KRH66809	Soybean	endoplasmic reticulum	50.62	54.99
KRG95135	Soybean	endoplasmic reticulum	50.12	54.45
Solyc06g073910.2.1	Tomato	cytosol, plasma membrane, vacuole	34.74	46.05
Solyc11g071800.1.1	Tomato	plastid, vacuole	41.19	42.46
Solyc03g114560.2.1	Tomato	extracellular	32.01	39.45
Solyc03g114530.2.1	Tomato	vacuole	32.01	38.86
Solyc12g039070.1.1	Tomato	nucleus	31.76	38.44
Solyc03g114550.1.1	Tomato	vacuole	25.81	37.96
Solyc03g114540.1.1	Tomato	vacuole	31.27	37.5
Solyc03g053130.2.1	Tomato	extracellular	34.74	33.82
Solyc02g082900.2.1	Tomato	vacuole	23.82	25.88
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	22.33	25.42

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844
InterPro:IPR011042	UniProt:K4CGA8	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	SUPFAM:SSF63829
EnsemblPlantsGene:Solyc07g055750.2	EnsemblPlants:Solyc07g055750.2.1	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI000276AC38
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:63678603..63680337

Molecular Weight (calculated)

44932.0 Da

IEP (calculated)

6.085

GRAVY (calculated)

-0.107

Length

403 amino acids

Sequence
(BLAST)

001: MQCVASLNSN RERSICVLFK NQSTKALKNL NIRKKIRPIQ MNDSNILLLF IATVALFSSV NLAFDDSENA LKSQNVLSKS EIIQLNGAIG PESVAFDPNG
101: EGPYIGVADG RILKFQGSHW ADFAVTSSQR ESCTLPFAPE MEHICGRPLG LRFDTKTGEL YIADAYFGLQ VVGPKGGLAT PLVQILEGEP LVFTNDVDID
201: DQDDVIYFTD TSTRYQRRQF VDSLLSRDAT GRLMKYTKST KTTEILIRGL AFANGVSLSK DRSFVLVAET SNFRILRYWL KGPLEGTHDT FAELPGFPDN
301: IRMNSKGEFW VAIQAIRSQS SFSNSEMGNE LLKLRFIAQK FNNLLRGGLL HATAIKLSED GRVLEVLEDV EGKTLRSISE VHEIYDKLMF GSVIMPFLGV
401: YEL

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.