Factsheet for Solyc10g079610.1.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 9
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076777	Potato	vacuole	94.62	94.62
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	70.97	71.35
Solyc04g040090.2.1	Tomato	vacuole	68.82	67.9
CDX72079	Canola	vacuole	59.41	66.97
AT3G57030.1	Thale cress	endoplasmic reticulum, extracellular, golgi	66.67	66.31
KRH66809	Soybean	endoplasmic reticulum	65.05	65.23
KRG95135	Soybean	endoplasmic reticulum	64.78	64.96
Bra007294.1-P	Field mustard	vacuole	64.78	64.44
Solyc07g055740.1.1	Tomato	vacuole	60.75	64.39
CDY06143	Canola	vacuole	65.32	63.28
Solyc07g055750.2.1	Tomato	golgi, plastid, vacuole	63.98	59.06
Solyc06g073910.2.1	Tomato	cytosol, plasma membrane, vacuole	38.44	47.04
Solyc11g071800.1.1	Tomato	plastid, vacuole	45.7	43.48
Solyc03g114560.2.1	Tomato	extracellular	37.37	42.51
Solyc03g114550.1.1	Tomato	vacuole	30.91	41.97
Solyc12g039070.1.1	Tomato	nucleus	37.1	41.44
Solyc03g114540.1.1	Tomato	vacuole	36.56	40.48
Solyc03g114530.2.1	Tomato	vacuole	35.75	40.06
Solyc03g053130.2.1	Tomato	extracellular	40.05	35.99
Solyc02g082900.2.1	Tomato	vacuole	26.61	26.68
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	25.27	26.55

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009505	GO:GO:0009506	GO:GO:0016020
GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	GO:GO:0030312	InterPro:IPR011042	UniProt:K4D2K2
PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	SUPFAM:SSF63829	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc10g079610.1
EnsemblPlants:Solyc10g079610.1.1	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI000276A8A6	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:61118178..61121074

Molecular Weight (calculated)

40746.8 Da

IEP (calculated)

7.382

GRAVY (calculated)

-0.091

Length

372 amino acids

Sequence
(BLAST)

001: MNALKLFLSA AALAIMAVLL TLSSKNVYSP PSIPGSKDLL SKSEVIHLKG AVGPESIAFD PNGEGPYTGV ADGRILKWNG DSDGWVDFAV TSSQRKECVH
101: PFAPQMEHVC GRPLGLRFDT RTGDLYIADA YLGLHVVGPS GGLATPLVTE VEGQPLRFTN DLDIDEQEDV IYFTDTSTQF QRRQFVASVV SGDKTGRLMK
201: YDKSTKSVTV LLRGLAFANG VALSKDKSFV LVAETSTCRV VRHWLKGPHA GKHDTFADLP GYPDNIRRNS RGEFWVGLHS KRSLLAKLVT SYSWFGKTTL
301: KLPFTFQQLH FLLVGGQPHA TAIKLSEDGQ VLDVLEDLES KTLKFISEVE EKNGKLWIGS VLVPFVGVHE LS

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.