CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06143	Canola	vacuole	97.27	83.59
AT3G57030.1	Thale cress	endoplasmic reticulum, extracellular, golgi	86.97	76.74
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	66.67	59.46
Solyc10g079610.1.1	Tomato	vacuole	66.97	59.41
PGSC0003DMT400076777	Potato	vacuole	66.97	59.41
CDX92388	Canola	vacuole	51.82	46.72
CDY70367	Canola	cytosol	37.27	44.89
CDY16615	Canola	endoplasmic reticulum, extracellular, vacuole	53.33	44.56
CDY22517	Canola	vacuole	48.79	43.63
CDX95058	Canola	vacuole	47.88	42.25
CDX79943	Canola	vacuole	46.36	41.46
CDY23857	Canola	vacuole	46.06	41.19
CDX93560	Canola	vacuole	48.79	40.97
CDY30962	Canola	vacuole	46.67	40.96
CDX76030	Canola	endoplasmic reticulum, golgi, vacuole	46.36	40.69
CDY22515	Canola	vacuole	43.03	40.69
CDY35420	Canola	vacuole	43.03	40.57
CDX76033	Canola	vacuole	45.76	40.16
CDY30963	Canola	vacuole	45.45	39.89
CDX72080	Canola	endoplasmic reticulum, extracellular, golgi	44.24	39.57
CDX67673	Canola	vacuole	43.94	39.19
CDX79944	Canola	vacuole	44.24	38.93
CDY54042	Canola	vacuole	43.64	38.92
CDX77108	Canola	vacuole	43.33	38.65
CDY23858	Canola	vacuole	43.64	38.5
CDY06144	Canola	vacuole	43.03	38.48
CDY30558	Canola	vacuole	43.33	38.34
CDY30959	Canola	extracellular, golgi, vacuole	42.42	37.84
CDY45861	Canola	vacuole	37.58	37.58
CDY47728	Canola	vacuole	36.67	37.0
CDY47397	Canola	vacuole	32.73	36.99
CDY39351	Canola	extracellular, plasma membrane, vacuole	39.09	36.96
CDX73039	Canola	vacuole	36.36	36.81
CDX73037	Canola	vacuole	36.06	36.28
CDX96507	Canola	vacuole	35.76	36.2
CDX73038	Canola	vacuole	35.45	36.0
CDX96505	Canola	vacuole	35.76	35.98
CDX96506	Canola	vacuole	35.15	35.69
CDY47729	Canola	vacuole	35.15	35.69
CDY45863	Canola	vacuole	34.85	35.38
CDY66188	Canola	vacuole	34.85	35.06
CDX68204	Canola	vacuole	34.85	35.06
CDY66189	Canola	vacuole	31.21	34.68
CDX89027	Canola	endoplasmic reticulum, vacuole	42.12	34.41
CDX71901	Canola	extracellular, golgi, vacuole	41.52	33.99
CDY05993	Canola	endoplasmic reticulum, golgi, vacuole	41.21	33.75
CDY16306	Canola	golgi, vacuole	24.55	22.69
CDY16307	Canola	golgi, vacuole	24.85	22.16
CDY33279	Canola	golgi, vacuole	24.85	22.1
CDX73720	Canola	golgi, vacuole	24.85	22.04
CDY33280	Canola	golgi, vacuole	24.55	21.89
CDX78005	Canola	vacuole	25.45	20.29

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:A0A078C7G3	EnsemblPlants:CDX72079	ProteinID:CDX72079
ProteinID:CDX72079.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016844	EnsemblPlantsGene:GSBRNA2T00155878001	InterPro:IPR011042	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22
SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI0004EDD389	SEG:seg

Description

BnaC08g27950D

Coordinates

chrLK031795:+:2247597..2249139

Molecular Weight (calculated)

36058.1 Da

IEP (calculated)

5.865

GRAVY (calculated)

-0.086

Length

330 amino acids

Sequence
(BLAST)

001: MTMLTVFFST AIVTTIAVLA SLSSQKGSGI FAPPKIAGSR DVFPSAKVVN LTGASGPESV AFDPSGEGPY VGVSDGRVLK WRGESLGWSD FAYTSANRQK
101: CVRPFAPELE HVCGRPLGLR FDEKTGDLYI ADAYFGLMIV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEH EDVIYFTDTS TRFQRRQFLA AVLNVDKTGR
201: LIKYDRSSKK VTVLVQGIAF ANGVALSKDR SFVLVAETTT CKILRLWLSG PKAGTQDVFT ELPGFPDNIR RNSNGEPHAT AMKLSESGEV LEVLEDREGK
301: RLRFISEVEE KDGKLWIGSV LMPFLGVYDL

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.