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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • plastid 1
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 4
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400076777 Potato vacuole 71.62 71.24
Solyc10g079610.1.1 Tomato vacuole 71.35 70.97
CDX72079 Canola vacuole 59.46 66.67
KRG95135 Soybean endoplasmic reticulum 65.95 65.77
KRH66809 Soybean endoplasmic reticulum 65.14 64.96
AT3G57030.1 Thale cress endoplasmic reticulum, extracellular, golgi 65.14 64.44
Bra007294.1-P Field mustard vacuole 64.32 63.64
CDY06143 Canola vacuole 64.86 62.5
VIT_06s0009g00850.t01 Wine grape cytosol 47.03 49.57
VIT_10s0042g00010.t01 Wine grape vacuole 41.08 48.25
VIT_13s0074g00070.t01 Wine grape vacuole 35.68 48.18
VIT_10s0042g00030.t01 Wine grape vacuole 34.86 47.25
VIT_10s0042g00050.t01 Wine grape vacuole 40.81 46.89
VIT_00s0575g00020.t01 Wine grape vacuole 40.81 46.89
VIT_00s0575g00010.t01 Wine grape vacuole 39.46 46.79
VIT_13s0074g00080.t01 Wine grape vacuole 40.54 46.58
VIT_10s0071g00010.t01 Wine grape vacuole 40.54 46.58
VIT_08s0007g05360.t01 Wine grape vacuole 47.03 46.03
VIT_10s0042g00020.t01 Wine grape vacuole 40.0 45.96
VIT_10s0071g00020.t01 Wine grape vacuole 38.11 45.63
VIT_10s0071g00250.t01 Wine grape vacuole 41.62 45.29
VIT_17s0000g04600.t01 Wine grape vacuole 35.95 38.78
VIT_05s0102g00880.t01 Wine grape endoplasmic reticulum, extracellular, golgi 42.43 38.67
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 18.38 37.57
VIT_17s0000g04610.t01 Wine grape vacuole 36.49 36.78
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 38.65 31.57
VIT_04s0210g00060.t01 Wine grape cytosol, mitochondrion 22.16 30.48
VIT_11s0016g00860.t01 Wine grape golgi, vacuole 25.95 26.3
VIT_04s0210g00130.t01 Wine grape plasma membrane, vacuole 20.0 25.87
VIT_04s0210g00120.t01 Wine grape vacuole 26.22 25.59
VIT_04s0210g00080.t01 Wine grape vacuole 25.95 25.33
VIT_11s0016g00880.t01 Wine grape plastid 25.14 25.27
VIT_04s0210g00100.t01 Wine grape cytosol 11.62 24.57
VIT_04s0210g00090.t01 Wine grape mitochondrion, vacuole 12.7 23.98
VIT_04s0210g00050.t01 Wine grape plastid 24.86 22.06
VIT_11s0016g00870.t01 Wine grape plasma membrane, vacuole 25.14 20.17
VIT_04s0210g00040.t01 Wine grape cytosol, peroxisome, vacuole 18.38 18.13
VIT_04s0210g00030.t01 Wine grape vacuole 24.59 11.77
Protein Annotations
EntrezGene:100248764wikigene:100248764Gene3D:2.120.10.30MapMan:50.4.3InterPro:6-blade_b-propeller_TolB-likeProteinID:CCB55320
ProteinID:CCB55320.1UniProt:F6HK98EMBL:FN595991GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005886
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009505GO:GO:0009506GO:GO:0016020
GO:GO:0016787GO:GO:0016788GO:GO:0016844GO:GO:0030312InterPro:IPR011042EntrezGene:LOC100248764
wikigene:LOC100248764PFAM:PF03088PANTHER:PTHR10426PANTHER:PTHR10426:SF22SUPFAM:SSF63829SignalP:SignalP-TM
InterPro:Strictosidine_synth_cons-regInterPro:Strictosidine_synthaseTIGR:TC54414TIGR:TC64680TMHMM:TMhelixUniParc:UPI00015CD336
ArrayExpress:VIT_08s0007g05370EnsemblPlantsGene:VIT_08s0007g05370EnsemblPlants:VIT_08s0007g05370.t01unigene:Vvi.6856RefSeq:XP_002273764RefSeq:XP_002273764.1
SEG:seg:::::
Description
No Description!
Coordinates
chr8:-:19317889..19319790
Molecular Weight (calculated)
40925.2 Da
IEP (calculated)
6.444
GRAVY (calculated)
-0.135
Length
370 amino acids
Sequence
(BLAST)
001: MNTKLILTAI TLAAISIILA VNSNHLFKPP SIPGTHDLLH GSEVIQVTGA FGPESIAFDP KGEGPYTGVA DGRVLKWEGD GRGWTDFAVT TSERKECVRP
101: FAPEMEHICG RPLGLRFDKK TGDLYIADAY FGLQVVEPNG GLATPLVTEV EGRRLLFTND MDIDEVEDVI YFTDTSTDFH RRQFMAALLS GDNTGRLMKY
201: DKSSKEVTVL LRGLAFANGV AMSKDRSFVL VAETTTGKII RYWLKGPNAG KSDVFAEVPG YPDNVRRNSK GEFWVALHAK KGPHANWITS NSWVGKTLLK
301: LPLTFKQLHK LIVVEAHATA IKLSEEGQVL EVLEDCEGKS MRFISEVEEH NGKLWLGSVM MPFIGVYDLH
Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.