Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400076777 | Potato | vacuole | 71.62 | 71.24 |
Solyc10g079610.1.1 | Tomato | vacuole | 71.35 | 70.97 |
CDX72079 | Canola | vacuole | 59.46 | 66.67 |
KRG95135 | Soybean | endoplasmic reticulum | 65.95 | 65.77 |
KRH66809 | Soybean | endoplasmic reticulum | 65.14 | 64.96 |
AT3G57030.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 65.14 | 64.44 |
Bra007294.1-P | Field mustard | vacuole | 64.32 | 63.64 |
CDY06143 | Canola | vacuole | 64.86 | 62.5 |
VIT_06s0009g00850.t01 | Wine grape | cytosol | 47.03 | 49.57 |
VIT_10s0042g00010.t01 | Wine grape | vacuole | 41.08 | 48.25 |
VIT_13s0074g00070.t01 | Wine grape | vacuole | 35.68 | 48.18 |
VIT_10s0042g00030.t01 | Wine grape | vacuole | 34.86 | 47.25 |
VIT_10s0042g00050.t01 | Wine grape | vacuole | 40.81 | 46.89 |
VIT_00s0575g00020.t01 | Wine grape | vacuole | 40.81 | 46.89 |
VIT_00s0575g00010.t01 | Wine grape | vacuole | 39.46 | 46.79 |
VIT_13s0074g00080.t01 | Wine grape | vacuole | 40.54 | 46.58 |
VIT_10s0071g00010.t01 | Wine grape | vacuole | 40.54 | 46.58 |
VIT_08s0007g05360.t01 | Wine grape | vacuole | 47.03 | 46.03 |
VIT_10s0042g00020.t01 | Wine grape | vacuole | 40.0 | 45.96 |
VIT_10s0071g00020.t01 | Wine grape | vacuole | 38.11 | 45.63 |
VIT_10s0071g00250.t01 | Wine grape | vacuole | 41.62 | 45.29 |
VIT_17s0000g04600.t01 | Wine grape | vacuole | 35.95 | 38.78 |
VIT_05s0102g00880.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 42.43 | 38.67 |
VIT_17s0000g04580.t01 | Wine grape | extracellular, vacuole | 18.38 | 37.57 |
VIT_17s0000g04610.t01 | Wine grape | vacuole | 36.49 | 36.78 |
VIT_17s0000g04590.t01 | Wine grape | endoplasmic reticulum, peroxisome, vacuole | 38.65 | 31.57 |
VIT_04s0210g00060.t01 | Wine grape | cytosol, mitochondrion | 22.16 | 30.48 |
VIT_11s0016g00860.t01 | Wine grape | golgi, vacuole | 25.95 | 26.3 |
VIT_04s0210g00130.t01 | Wine grape | plasma membrane, vacuole | 20.0 | 25.87 |
VIT_04s0210g00120.t01 | Wine grape | vacuole | 26.22 | 25.59 |
VIT_04s0210g00080.t01 | Wine grape | vacuole | 25.95 | 25.33 |
VIT_11s0016g00880.t01 | Wine grape | plastid | 25.14 | 25.27 |
VIT_04s0210g00100.t01 | Wine grape | cytosol | 11.62 | 24.57 |
VIT_04s0210g00090.t01 | Wine grape | mitochondrion, vacuole | 12.7 | 23.98 |
VIT_04s0210g00050.t01 | Wine grape | plastid | 24.86 | 22.06 |
VIT_11s0016g00870.t01 | Wine grape | plasma membrane, vacuole | 25.14 | 20.17 |
VIT_04s0210g00040.t01 | Wine grape | cytosol, peroxisome, vacuole | 18.38 | 18.13 |
VIT_04s0210g00030.t01 | Wine grape | vacuole | 24.59 | 11.77 |
Protein Annotations
EntrezGene:100248764 | wikigene:100248764 | Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | ProteinID:CCB55320 |
ProteinID:CCB55320.1 | UniProt:F6HK98 | EMBL:FN595991 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009505 | GO:GO:0009506 | GO:GO:0016020 |
GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | GO:GO:0030312 | InterPro:IPR011042 | EntrezGene:LOC100248764 |
wikigene:LOC100248764 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF22 | SUPFAM:SSF63829 | SignalP:SignalP-TM |
InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TIGR:TC54414 | TIGR:TC64680 | TMHMM:TMhelix | UniParc:UPI00015CD336 |
ArrayExpress:VIT_08s0007g05370 | EnsemblPlantsGene:VIT_08s0007g05370 | EnsemblPlants:VIT_08s0007g05370.t01 | unigene:Vvi.6856 | RefSeq:XP_002273764 | RefSeq:XP_002273764.1 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:19317889..19319790
Molecular Weight (calculated)
40925.2 Da
IEP (calculated)
6.444
GRAVY (calculated)
-0.135
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTKLILTAI TLAAISIILA VNSNHLFKPP SIPGTHDLLH GSEVIQVTGA FGPESIAFDP KGEGPYTGVA DGRVLKWEGD GRGWTDFAVT TSERKECVRP
101: FAPEMEHICG RPLGLRFDKK TGDLYIADAY FGLQVVEPNG GLATPLVTEV EGRRLLFTND MDIDEVEDVI YFTDTSTDFH RRQFMAALLS GDNTGRLMKY
201: DKSSKEVTVL LRGLAFANGV AMSKDRSFVL VAETTTGKII RYWLKGPNAG KSDVFAEVPG YPDNVRRNSK GEFWVALHAK KGPHANWITS NSWVGKTLLK
301: LPLTFKQLHK LIVVEAHATA IKLSEEGQVL EVLEDCEGKS MRFISEVEEH NGKLWLGSVM MPFIGVYDLH
101: FAPEMEHICG RPLGLRFDKK TGDLYIADAY FGLQVVEPNG GLATPLVTEV EGRRLLFTND MDIDEVEDVI YFTDTSTDFH RRQFMAALLS GDNTGRLMKY
201: DKSSKEVTVL LRGLAFANGV AMSKDRSFVL VAETTTGKII RYWLKGPNAG KSDVFAEVPG YPDNVRRNSK GEFWVALHAK KGPHANWITS NSWVGKTLLK
301: LPLTFKQLHK LIVVEAHATA IKLSEEGQVL EVLEDCEGKS MRFISEVEEH NGKLWLGSVM MPFIGVYDLH
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.