Factsheet for VIT_08s0007g05360.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000222.1-P	Field mustard	cytosol	47.35	51.88
AT2G41290.1	Thale cress	vacuole	51.06	51.33
KRH66810	Soybean	vacuole	51.59	51.05
CDY22515	Canola	vacuole	47.09	51.0
CDY35420	Canola	vacuole	46.83	50.57
CDY23858	Canola	vacuole	49.74	50.27
CDX79944	Canola	vacuole	49.74	50.13
Bra004613.1-P	Field mustard	vacuole	49.74	50.13
VIT_13s0074g00070.t01	Wine grape	vacuole	34.66	47.81
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	42.59	47.21
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	46.03	47.03
VIT_10s0071g00020.t01	Wine grape	vacuole	38.36	46.93
VIT_10s0042g00010.t01	Wine grape	vacuole	38.89	46.67
VIT_10s0042g00050.t01	Wine grape	vacuole	39.42	46.27
VIT_10s0071g00250.t01	Wine grape	vacuole	41.53	46.18
VIT_10s0042g00030.t01	Wine grape	vacuole	33.33	46.15
VIT_00s0575g00010.t01	Wine grape	vacuole	38.1	46.15
VIT_13s0074g00080.t01	Wine grape	vacuole	39.15	45.96
VIT_10s0071g00010.t01	Wine grape	vacuole	38.89	45.65
VIT_00s0575g00020.t01	Wine grape	vacuole	38.89	45.65
VIT_06s0009g00850.t01	Wine grape	cytosol	42.33	45.58
VIT_10s0042g00020.t01	Wine grape	vacuole	38.36	45.03
HORVU5Hr1G043200.4	Barley	vacuole	43.92	44.38
TraesCS5A01G131200.1	Wheat	vacuole	29.37	43.87
TraesCS5D01G139700.1	Wheat	vacuole	43.12	43.7
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	42.86	43.32
EES07950	Sorghum	vacuole	44.71	43.11
KXG27696	Sorghum	vacuole	43.92	42.56
VIT_17s0000g04600.t01	Wine grape	vacuole	37.3	41.11
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	18.78	39.23
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	43.92	38.6
VIT_17s0000g04610.t01	Wine grape	vacuole	37.3	38.42
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	37.04	34.48
Zm00001d052471_P001	Maize	vacuole	43.92	34.16
Os11t0142400-01	Rice	extracellular	8.2	34.07
Os11t0142300-00	Rice	extracellular, plasma membrane	9.52	32.14
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	38.1	31.79
VIT_04s0210g00060.t01	Wine grape	cytosol, mitochondrion	21.43	30.11
VIT_04s0210g00130.t01	Wine grape	plasma membrane, vacuole	19.58	25.87
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	24.6	25.48
VIT_04s0210g00120.t01	Wine grape	vacuole	24.6	24.54
VIT_04s0210g00090.t01	Wine grape	mitochondrion, vacuole	12.7	24.49
VIT_11s0016g00880.t01	Wine grape	plastid	23.81	24.46
VIT_04s0210g00080.t01	Wine grape	vacuole	24.34	24.27
VIT_04s0210g00050.t01	Wine grape	plastid	24.6	22.3
VIT_04s0210g00100.t01	Wine grape	cytosol	10.32	22.29
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	24.34	19.96
VIT_04s0210g00040.t01	Wine grape	cytosol, peroxisome, vacuole	17.2	17.33
VIT_04s0210g00030.t01	Wine grape	vacuole	23.55	11.51

Protein Annotations

EntrezGene:100247001	wikigene:100247001	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	ProteinID:CCB55321
ProteinID:CCB55321.1	UniProt:F6HK99	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042
EntrezGene:LOC100247001	wikigene:LOC100247001	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF29	SUPFAM:SSF63829
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TIGR:TC60562	TMHMM:TMhelix	UniParc:UPI00015CD335	ArrayExpress:VIT_08s0007g05360
EnsemblPlantsGene:VIT_08s0007g05360	EnsemblPlants:VIT_08s0007g05360.t01	unigene:Vvi.12319	RefSeq:XP_002267323	RefSeq:XP_002267323.1	RefSeq:XP_003632739
RefSeq:XP_003632739.1	RefSeq:XP_019077010.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:-:19309049..19311600

Molecular Weight (calculated)

41398.3 Da

IEP (calculated)

7.959

GRAVY (calculated)

-0.142

Length

378 amino acids

Sequence
(BLAST)

001: MAMSSKLLLA AAAAAAFLIT ALIAGKRTSL SSPEFDSEKF SNQKDAVIPI PTPGAIGPES LAFDSVGGGP YTGVSDGRII KWEENEERWV DFATTSSKRE
101: GCRGSRDHVP LEHICGRPLG LSFSELTGEL YIADAYMGLL VVGPNGGLAS TVASEAQGTP FGFSNGVDIH QTNGAVYFSD SSSRYQRRNF VAAIISGDNT
201: GRLMKYEPES KQVTVLLRSL GFPNGVALSK NGDFILLSET SRCRILRFWL QTSKAGTVEV FTLLPGFPDN IKRNSKGEFW VGMHSRKGKL VEWFLSYPWI
301: GRTLLKLPFP HGFLSFFSKW RKTGFAVRLS EEGEVLEIFE PKNGNGWISS ISEVYERDGS LWIGSVTTPC VGKYEMQT

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.