Factsheet for Bra004613.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79944	Canola	vacuole	99.2	99.2
Bra000222.1-P	Field mustard	cytosol	77.33	84.06
VIT_08s0007g05360.t01	Wine grape	vacuole	50.13	49.74
KRH66810	Soybean	vacuole	47.47	46.6
Bra007294.1-P	Field mustard	vacuole	42.93	43.05
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	37.6	41.35
HORVU5Hr1G043200.4	Barley	vacuole	40.8	40.91
TraesCS5D01G139700.1	Wheat	vacuole	40.53	40.75
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	40.0	40.11
EES07950	Sorghum	vacuole	41.87	40.05
KXG27696	Sorghum	vacuole	41.6	40.0
Bra018623.1-P	Field mustard	cytosol	37.07	39.6
TraesCS5A01G131200.1	Wheat	vacuole	26.67	39.53
Bra002383.1-P	Field mustard	vacuole	40.0	37.97
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	42.13	36.74
Bra008127.1-P	Field mustard	vacuole	30.93	35.37
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	21.87	34.89
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	34.13	34.59
Bra008126.1-P	Field mustard	vacuole	30.13	34.56
Bra000223.1-P	Field mustard	vacuole	33.87	34.42
Bra015943.1-P	Field mustard	vacuole	29.87	34.36
Bra034344.1-P	Field mustard	vacuole	33.87	34.32
Bra004614.1-P	Field mustard	vacuole	33.33	33.88
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	34.4	33.86
Bra003263.1-P	Field mustard	vacuole	32.53	32.97
Bra008124.1-P	Field mustard	vacuole	28.53	32.92
Bra007293.1-P	Field mustard	vacuole	32.27	32.79
Bra003820.1-P	Field mustard	vacuole	27.73	32.2
Zm00001d052471_P001	Maize	vacuole	41.07	31.69
Bra014536.1-P	Field mustard	vacuole	34.4	31.16
Bra007457.1-P	Field mustard	golgi, vacuole	33.87	30.75
Os11t0142400-01	Rice	extracellular	6.67	27.47
Os11t0142300-00	Rice	extracellular, plasma membrane	7.73	25.89
Bra038899.1-P	Field mustard	golgi, vacuole	23.73	23.99
Bra038898.1-P	Field mustard	golgi, vacuole	23.73	22.42
Bra036798.1-P	Field mustard	vacuole	24.27	21.98
Bra015944.1-P	Field mustard	vacuole	27.73	17.42

Protein Annotations

EnsemblPlants:Bra004613.1	EnsemblPlants:Bra004613.1-P	EnsemblPlantsGene:Bra004613	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF29	PFAM:PF03088	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF63829	UniParc:UPI000254768B	UniProt:M4CK79	MapMan:50.4.3	:

Description

AT2G41290 (E=9e-176) | strictosidine synthase family protein

Coordinates

chrA05:-:1054463..1056985

Molecular Weight (calculated)

41619.5 Da

IEP (calculated)

7.363

GRAVY (calculated)

-0.235

Length

375 amino acids

Sequence
(BLAST)

001: MMKLFFVLAI SFALLLSLFD SSGESPKHGE SMLTVHFPDF HLIPTTGALG PESFAFDFYG DGPFTGLSDG RIVKWIANES RWMDFAVTTP TREGCEGPHE
101: HQRTEHECGR PLGLAFEKST GDLYIADAYM GLLKVGRQGG LANQVSTRQL DKPLRFTNAV EIDPRTGVVY FTDSSSVYQR RNYIGAIMSG DRTGRLMKYD
201: PKTNQVTTLV SNLSFANGVV MSQNGDYLLV AETATSRILR YWLNDTSVSK SHEKYEIFAE GLPGFPDNIK RSPRGGFWVG LNTKHSKLTK FAMSNAWLGR
301: AALGLPVDWM KVHSYWAKYK GNGMAVRLSE GSGVISEVFE GTIGNKWISI SEVEEHDGTL WVGSVNTPYT GVYKI

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.