Factsheet for Bra014652.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi, vacuole

Predictor Summary:

cytosol 1
extracellular 5
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30959	Canola	extracellular, golgi, vacuole	97.84	97.84
CDY39351	Canola	extracellular, plasma membrane, vacuole	90.0	95.42
Bra003263.1-P	Field mustard	vacuole	90.54	90.54
Bra034344.1-P	Field mustard	vacuole	88.65	88.65
Bra007293.1-P	Field mustard	vacuole	87.84	88.08
AT3G57020.1	Thale cress	vacuole	85.14	85.14
Bra004614.1-P	Field mustard	vacuole	66.76	66.94
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	68.65	66.67
Bra000223.1-P	Field mustard	vacuole	65.68	65.85
Bra018623.1-P	Field mustard	cytosol	40.0	42.17
KRH66809	Soybean	endoplasmic reticulum	41.35	41.24
KRG95135	Soybean	endoplasmic reticulum	41.35	41.24
Bra007294.1-P	Field mustard	vacuole	41.08	40.64
Bra002383.1-P	Field mustard	vacuole	39.73	37.22
Bra000222.1-P	Field mustard	cytosol	34.32	36.81
Bra004613.1-P	Field mustard	vacuole	34.59	34.13
Bra008126.1-P	Field mustard	vacuole	28.11	31.8
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	19.73	31.06
Bra007457.1-P	Field mustard	golgi, vacuole	34.59	30.99
Bra014536.1-P	Field mustard	vacuole	34.59	30.92
Bra008127.1-P	Field mustard	vacuole	26.76	30.18
Bra015943.1-P	Field mustard	vacuole	25.95	29.45
Bra003820.1-P	Field mustard	vacuole	25.41	29.1
Bra008124.1-P	Field mustard	vacuole	25.14	28.62
Bra038899.1-P	Field mustard	golgi, vacuole	21.62	21.56
Bra038898.1-P	Field mustard	golgi, vacuole	20.54	19.14
Bra036798.1-P	Field mustard	vacuole	21.35	19.08
Bra015944.1-P	Field mustard	vacuole	24.32	15.08

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EnsemblPlantsGene:Bra014652	EnsemblPlants:Bra014652.1	EnsemblPlants:Bra014652.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016844	InterPro:IPR011042	UniProt:M4DDT3	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF24	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
UniParc:UPI00025445A0	SEG:seg	:	:	:	:

Description

AT3G57020 (E=2e-180) | strictosidine synthase family protein

Coordinates

chrA04:+:2029942..2033063

Molecular Weight (calculated)

41247.7 Da

IEP (calculated)

7.088

GRAVY (calculated)

-0.199

Length

370 amino acids

Sequence
(BLAST)

001: MPISEKLPTW AVVPAVFAVF SVISYQILIA PDNLNGTKNV LSMAKTIPLP VDGPESIEWD PQGGGPYAAV VDGRILKWRG DGLGWVEFAY TSPHRGNCSR
101: HEVVPTCGRP LGLSFEKKTG DLYICDGYLG VMKVGPEGGL AELVVDQAEG RKVMFANQMD IDEEEDVFYF NDSSDKYHFR DVFYVIVNGE RPGRVIRYNK
201: KTKEAKVVMD NLRCNNGLAL NKDRSFLISC ESATGLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTPTGD FWIGIHCKKN LLGRLVVNNQ WLGKLVEKTV
301: KLELLIGLVN GFKPHGVAVK ISGETGEIVE ILEDKEGKTM QYVSEAYERD DGKLWFGSVF SPAVWVLDRK

Best Arabidopsis Sequence Match ( AT3G57020.1 )
(BLAST)

001: MPINQKIPTW FAVPAVFAVL SVISYQTLIV PENLEGAKNV LTMAKTIPIP VAGPESIEFD PKGEGPYAAV VDGRILKWRG DDLGWVDFAY TSPHRGNCSK
101: TEVVPTCGRP LGLTFEKKTG DLYICDGYLG LMKVGPEGGL AELIVDEAEG RKVMFANQGD IDEEEDVFYF NDSSDKYHFR DVFFVAVSGE RSGRVIRYDK
201: KTKEAKVIMD NLVCNNGLAL NKDRSFLITC ESGTSLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTSTGD FWIGLHCKKN LIGRLIVKYK WLGKLVEKTM
301: KLEYVIAFIN GFKPHGVAVK ISGETGEVLE LLEDKEGKTM KYVSEAYERD DGKLWFGSVY WPAVWVLDRK

Arabidopsis Description

SSL9Protein STRICTOSIDINE SYNTHASE-LIKE 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.