Factsheet for Bra000222.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35420	Canola	vacuole	92.46	91.14
Bra004613.1-P	Field mustard	vacuole	84.06	77.33
AT2G41290.1	Thale cress	vacuole	82.32	75.53
VIT_08s0007g05360.t01	Wine grape	vacuole	51.88	47.35
KRH66810	Soybean	vacuole	52.17	47.12
Bra007294.1-P	Field mustard	vacuole	45.51	41.98
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	40.58	41.06
Bra018623.1-P	Field mustard	cytosol	40.87	40.17
TraesCS5D01G139700.1	Wheat	vacuole	41.45	38.34
HORVU5Hr1G043200.4	Barley	vacuole	41.16	37.97
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	40.87	37.7
TraesCS5A01G131200.1	Wheat	vacuole	27.54	37.55
KXG27696	Sorghum	vacuole	41.16	36.41
EES07950	Sorghum	vacuole	41.16	36.22
Bra002383.1-P	Field mustard	vacuole	40.87	35.7
Bra008127.1-P	Field mustard	vacuole	33.62	35.37
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.06	35.32
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	36.81	34.32
Bra034344.1-P	Field mustard	vacuole	36.81	34.32
Bra008126.1-P	Field mustard	vacuole	32.17	33.95
Bra007293.1-P	Field mustard	vacuole	35.94	33.6
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	36.81	33.33
Bra003263.1-P	Field mustard	vacuole	35.65	33.24
Bra015943.1-P	Field mustard	vacuole	31.3	33.13
Bra003820.1-P	Field mustard	vacuole	30.72	32.82
Bra000223.1-P	Field mustard	vacuole	35.07	32.79
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	40.87	32.79
Bra008124.1-P	Field mustard	vacuole	30.72	32.62
Bra004614.1-P	Field mustard	vacuole	34.78	32.52
Bra007457.1-P	Field mustard	golgi, vacuole	37.1	30.99
Bra014536.1-P	Field mustard	vacuole	36.81	30.68
Zm00001d052471_P001	Maize	vacuole	40.58	28.81
Os11t0142400-01	Rice	extracellular	6.96	26.37
Os11t0142300-00	Rice	extracellular, plasma membrane	7.25	22.32
Bra038899.1-P	Field mustard	golgi, vacuole	23.77	22.1
Bra038898.1-P	Field mustard	golgi, vacuole	23.19	20.15
Bra036798.1-P	Field mustard	vacuole	23.77	19.81
Bra015944.1-P	Field mustard	vacuole	30.43	17.59

Protein Annotations

EnsemblPlants:Bra000222.1	EnsemblPlants:Bra000222.1-P	EnsemblPlantsGene:Bra000222	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF29	PFAM:PF03088	SUPFAM:SSF63829
UniParc:UPI0002540345	UniProt:M4C7P4	MapMan:50.4.3	:	:	:

Description

AT2G41290 (E=3e-169) | strictosidine synthase family protein

Coordinates

chrA03:-:9980845..9982911

Molecular Weight (calculated)

38665.0 Da

IEP (calculated)

8.715

GRAVY (calculated)

-0.351

Length

345 amino acids

Sequence
(BLAST)

001: MLTVHFPEFR LIPTTGASGP ESFVFDISGE GPYTGLSDGR IVKWIANESR WIDFAVTTPT REGCEGPHEH QRTEDVCGRP LGLAFEKSTG DLYIADAYMG
101: LLKVGREGGL ANQMLTRQLD EPLRFTNGLD VDPRTRVVYF TDSSSVYQRR NYIGVMMSGD RTGRLMKYDP NTKQVTTLLS NLAFPNGVVL SQNGEYLLVA
201: ETAKCRILRY WLNDTTSASK SRESYEIFSD RLPGFPDNIK RSPRGGFWIG VNTKHTKLTK FAMSNVWLGR AALGLSVDWM KVHSFWASYK GNGMAVRLSE
301: GSGAISEVFE GKNGNRWMSI SEVEERDRTL WVGSVNTPFV GMYKI

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.