Factsheet for Zm00001d052471_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07950	Sorghum	vacuole	61.93	76.79
KXG27696	Sorghum	vacuole	61.11	76.15
TraesCS5A01G131200.1	Wheat	vacuole	33.95	65.22
HORVU5Hr1G043200.4	Barley	vacuole	49.38	64.17
TraesCS5D01G139700.1	Wheat	vacuole	49.18	64.08
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	49.18	63.9
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	49.18	55.58
Os11t0142400-01	Rice	extracellular	10.08	53.85
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	14.61	44.1
VIT_08s0007g05360.t01	Wine grape	vacuole	34.16	43.92
Zm00001d029115_P001	Maize	extracellular, vacuole	20.16	41.88
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	29.22	41.4
CDY23858	Canola	vacuole	31.69	41.18
Bra004613.1-P	Field mustard	vacuole	31.69	41.07
CDX79944	Canola	vacuole	31.69	41.07
Bra000222.1-P	Field mustard	cytosol	28.81	40.58
AT2G41290.1	Thale cress	vacuole	31.07	40.16
CDY22515	Canola	vacuole	28.6	39.83
KRH66810	Soybean	vacuole	31.07	39.53
CDY35420	Canola	vacuole	28.4	39.43
Zm00001d029108_P001	Maize	vacuole	25.51	39.12
Zm00001d029117_P001	Maize	vacuole	27.16	39.05
Zm00001d012249_P001	Maize	vacuole	27.57	38.84
Zm00001d029111_P001	Maize	vacuole	26.95	38.76
Zm00001d012252_P001	Maize	vacuole	27.37	38.55
Zm00001d012371_P001	Maize	golgi, vacuole	27.16	38.26
Zm00001d012368_P001	Maize	golgi, vacuole	27.16	38.26
Zm00001d012366_P001	Maize	vacuole	27.16	38.26
Zm00001d012377_P001	Maize	vacuole	26.95	37.97
Zm00001d012375_P001	Maize	vacuole	25.72	37.31
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	11.11	36.99
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	25.31	36.07
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	29.42	34.71
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	13.99	33.01
Zm00001d034032_P001	Maize	plasma membrane	30.04	27.09
Zm00001d006853_P001	Maize	vacuole	18.93	25.07
Zm00001d012373_P001	Maize	vacuole	26.95	22.28

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A1D6QHE7	ProteinID:AQK57294.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042
PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0008447667	EnsemblPlantsGene:Zm00001d052471	EnsemblPlants:Zm00001d052471_P001	EnsemblPlants:Zm00001d052471_T001
SEG:seg	:	:	:	:	:

Description

Protein STRICTOSIDINE SYNTHASE-LIKE 2

Coordinates

chr4:+:190740161..190743671

Molecular Weight (calculated)

51565.8 Da

IEP (calculated)

8.467

GRAVY (calculated)

-0.073

Length

486 amino acids

Sequence
(BLAST)

001: MKMAVLAGAA VVAVAAAAMV AALLSSPDAL RDVAVLEIGG GEGRVELVPV DAGAAGPESL AFDPAGGGPY AGVSDGRVLR WVPGERRWEE HSASCAPELL
101: LEIGDAELLP LDGAAGPESL VFAGGYGDGG EGGPRSRACR TAGCLGAGGA ALGRALLLRA QTSSFSRETL LVPNQPESSA YGSRLTVVCR PPPSKLDSCR
201: GSQDPGREHE CGRPLGLKFN PDTGELYVAD AYHGLRMVAP GPGGGKASRP VAPEWWQGAR AFSFANGVEV DPGTGAVYFT ETSTRFQRRE FLRIVVSGDT
301: TGRLLRYDPR GGGGVEVLAD GLAFPNGLAM SSDGTHLLLA ETTTGRILRY WLRPTAPKAP ALLEEVARLP WFPDNIRMSP RGGFWVGLHA RRGKLAQYCI
401: SYPWLRRLVL ALPPRHVQRA SSLLSRLGRQ VIALRLSEED GRVVEMASVH GDLRRVFRSV SEVAERNGSI WIGSVMSPFL GVYKLQ

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.