Factsheet for Zm00001d020306_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96671	Sorghum	endoplasmic reticulum, golgi	90.38	88.57
TraesCS5D01G202700.1	Wheat	vacuole	74.05	73.41
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	74.05	73.41
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	72.89	72.25
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	73.47	66.84
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	33.53	55.83
Zm00001d029115_P001	Maize	extracellular, vacuole	37.9	55.56
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	24.78	52.8
Zm00001d029117_P001	Maize	vacuole	51.31	52.07
Zm00001d029111_P001	Maize	vacuole	51.02	51.78
Zm00001d012368_P001	Maize	golgi, vacuole	51.6	51.3
Zm00001d012377_P001	Maize	vacuole	51.6	51.3
Zm00001d012371_P001	Maize	golgi, vacuole	51.6	51.3
Zm00001d012366_P001	Maize	vacuole	51.6	51.3
Zm00001d029108_P001	Maize	vacuole	46.94	50.79
Zm00001d012249_P001	Maize	vacuole	51.02	50.72
Zm00001d012375_P001	Maize	vacuole	49.27	50.45
Zm00001d012252_P001	Maize	vacuole	50.73	50.43
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	45.48	50.32
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	19.83	46.58
GSMUA_Achr5P05340_001	Banana	vacuole	48.1	45.96
VIT_10s0042g00010.t01	Wine grape	vacuole	40.52	44.13
VIT_13s0074g00070.t01	Wine grape	vacuole	34.69	43.43
VIT_00s0575g00010.t01	Wine grape	vacuole	39.36	43.27
VIT_10s0042g00020.t01	Wine grape	vacuole	39.94	42.55
VIT_13s0074g00080.t01	Wine grape	vacuole	39.94	42.55
VIT_10s0071g00020.t01	Wine grape	vacuole	38.19	42.39
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.16	41.99
VIT_00s0575g00020.t01	Wine grape	vacuole	39.36	41.93
VIT_10s0042g00050.t01	Wine grape	vacuole	39.36	41.93
VIT_10s0071g00010.t01	Wine grape	vacuole	39.36	41.93
VIT_10s0042g00030.t01	Wine grape	vacuole	33.24	41.76
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	27.99	40.85
PGSC0003DMT400063282	Potato	extracellular, vacuole	18.37	40.65
VIT_17s0000g04600.t01	Wine grape	vacuole	40.23	40.23
PGSC0003DMT400056839	Potato	vacuole	36.44	40.06
CDX96505	Canola	vacuole	37.03	38.72
Solyc03g114550.1.1	Tomato	vacuole	30.9	38.69
KRH07462	Soybean	vacuole	39.07	38.62
CDX73037	Canola	vacuole	36.73	38.41
Solyc12g039070.1.1	Tomato	nucleus	37.03	38.14
AT1G74000.1	Thale cress	vacuole	36.44	37.99
CDY47729	Canola	vacuole	35.86	37.85
KRH45407	Soybean	nucleus	38.48	37.82
CDX73038	Canola	vacuole	35.57	37.54
CDX96506	Canola	vacuole	35.57	37.54
Bra008124.1-P	Field mustard	vacuole	35.57	37.54
VIT_10s0071g00250.t01	Wine grape	vacuole	37.03	37.35
CDY45863	Canola	vacuole	35.28	37.23
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	30.03	37.18
AT1G74010.1	Thale cress	vacuole	34.99	36.92
Bra008127.1-P	Field mustard	vacuole	34.69	36.28
Bra003820.1-P	Field mustard	vacuole	33.82	35.91
PGSC0003DMT400063277	Potato	vacuole	34.69	35.84
CDY45861	Canola	vacuole	34.4	35.76
KRH03206	Soybean	vacuole	34.99	35.71
AT1G74020.1	Thale cress	vacuole	34.69	35.52
Solyc03g114560.2.1	Tomato	extracellular	33.82	35.47
CDY47728	Canola	vacuole	33.82	35.47
PGSC0003DMT400063274	Potato	vacuole	34.69	35.42
CDY66189	Canola	vacuole	30.61	35.35
KRH54773	Soybean	vacuole	34.69	35.31
Bra008126.1-P	Field mustard	vacuole	33.53	35.17
KRH56734	Soybean	vacuole	34.99	35.09
Solyc03g114530.2.1	Tomato	vacuole	33.82	34.94
PGSC0003DMT400063286	Potato	vacuole	33.82	34.73
Solyc03g114540.1.1	Tomato	vacuole	33.82	34.52
CDY66188	Canola	vacuole	32.94	34.45
CDX68204	Canola	vacuole	32.94	34.45
CDX96507	Canola	vacuole	32.36	34.05
CDX73039	Canola	vacuole	32.36	34.05
Bra015943.1-P	Field mustard	vacuole	32.36	34.05
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	39.07	32.52
VIT_17s0000g04610.t01	Wine grape	vacuole	33.53	31.34
KRH63133	Soybean	peroxisome, vacuole	15.45	30.64
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	40.23	30.46
Zm00001d012373_P001	Maize	vacuole	51.31	29.93
Zm00001d052471_P001	Maize	vacuole	41.4	29.22
Zm00001d034032_P001	Maize	plasma membrane	41.11	26.16
Zm00001d006853_P001	Maize	vacuole	25.95	24.25
Bra015944.1-P	Field mustard	vacuole	34.99	20.1

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A1D6I3E1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042	ProteinID:ONM54672.1
PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF60	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0000E6290D	EnsemblPlantsGene:Zm00001d020306	EnsemblPlants:Zm00001d020306_P001	EnsemblPlants:Zm00001d020306_T001
SEG:seg	:	:	:	:	:

Description

Strictosidine synthase 3

Coordinates

chr7:+:105042700..105045690

Molecular Weight (calculated)

36170.8 Da

IEP (calculated)

8.050

GRAVY (calculated)

0.010

Length

343 amino acids

Sequence
(BLAST)

001: MAAAATRSLH SFLALLLLLA AAAAAAALSY ETKSIDPGLV VMTLPEPVSG PESLAFDGRG GGPYSGVSDG RVLRWQGPLR GWTEFAYNSK HRSVALCAPD
101: KKLVVPESLC GRPLGLQFHR QSGDLYVADA YLGLLRVAAR GGLAQVVATE AAGGPFNFLN GLDVDQRTGD VYFTDSSATY RRSDYLLVVA MGDETGRLLR
201: YERRTGRVGV LQAGLSYPNG VAVSADGTHV VVAHTALCEL RRYWIRGARA GTSDTFAELP GYPDNLRADG RGGYWVALSS GVAADEAAAA PTVAVRVSRD
301: GNVTEALDGF SFVSVSEVAQ RGGALWVGSV DTPYAGQLKR RAS

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.