Factsheet for PGSC0003DMT400063277

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g114530.2.1	Tomato	vacuole	95.18	95.18
PGSC0003DMT400063282	Potato	extracellular, vacuole	31.93	68.39
PGSC0003DMT400063286	Potato	vacuole	68.07	67.66
PGSC0003DMT400063274	Potato	vacuole	67.77	66.96
PGSC0003DMT400056839	Potato	vacuole	54.82	58.33
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	45.78	54.87
VIT_17s0000g04600.t01	Wine grape	vacuole	48.49	46.94
CDX73037	Canola	vacuole	42.77	43.29
CDX96505	Canola	vacuole	41.87	42.38
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	29.52	41.7
CDY47728	Canola	vacuole	40.36	40.98
Bra008126.1-P	Field mustard	vacuole	40.06	40.67
Bra015943.1-P	Field mustard	vacuole	39.76	40.49
CDX73039	Canola	vacuole	39.76	40.49
CDX96507	Canola	vacuole	39.76	40.49
AT1G74000.1	Thale cress	vacuole	39.76	40.12
KRH54773	Soybean	vacuole	40.66	40.06
AT1G74010.1	Thale cress	vacuole	39.16	40.0
CDX96506	Canola	vacuole	38.86	39.69
CDY47729	Canola	vacuole	38.86	39.69
KRH03206	Soybean	vacuole	40.06	39.58
KRH56734	Soybean	vacuole	40.66	39.47
Bra008124.1-P	Field mustard	vacuole	38.55	39.38
CDY45863	Canola	vacuole	38.55	39.38
Bra008127.1-P	Field mustard	vacuole	38.86	39.33
CDX73038	Canola	vacuole	38.25	39.08
AT1G74020.1	Thale cress	vacuole	39.16	38.81
CDY45861	Canola	vacuole	38.25	38.48
Zm00001d029115_P001	Maize	extracellular, vacuole	27.11	38.46
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	35.84	38.39
KRH63133	Soybean	peroxisome, vacuole	19.88	38.15
PGSC0003DMT400044684	Potato	vacuole	38.55	36.57
PGSC0003DMT400076777	Potato	vacuole	40.96	36.56
TraesCS3B01G559000.1	Wheat	cytosol	20.48	36.36
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	31.63	36.08
TraesCS2A01G078000.1	Wheat	vacuole	37.05	35.86
Zm00001d029108_P001	Maize	vacuole	34.04	35.65
OQU75879	Sorghum	vacuole	32.83	35.62
HORVU6Hr1G026020.1	Barley	cytosol	26.51	35.48
TraesCS2B01G092900.1	Wheat	golgi, vacuole	36.45	35.38
TraesCS2D01G076000.1	Wheat	golgi, vacuole	36.45	35.28
TraesCS2D01G076200.1	Wheat	vacuole	36.45	35.28
Zm00001d029117_P001	Maize	vacuole	35.84	35.21
TraesCS5B01G382800.1	Wheat	vacuole	36.14	35.19
TraesCS2B01G093000.1	Wheat	golgi, vacuole	36.14	34.99
PGSC0003DMT400044685	Potato	extracellular	28.31	34.94
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	15.36	34.93
Zm00001d029111_P001	Maize	vacuole	35.54	34.91
HORVU2Hr1G012970.2	Barley	mitochondrion	36.75	34.86
TraesCS3B01G289800.1	Wheat	vacuole	35.24	34.82
HORVU3Hr1G065520.3	Barley	extracellular	33.73	34.78
TraesCS2D01G076400.1	Wheat	vacuole	35.84	34.69
TraesCSU01G189700.1	Wheat	vacuole	35.84	34.69
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	35.84	34.69
PGSC0003DMT400044531	Potato	vacuole	38.86	34.58
GSMUA_Achr5P05340_001	Banana	vacuole	37.35	34.54
TraesCS3A01G256600.1	Wheat	vacuole	34.94	34.52
HORVU5Hr1G093840.1	Barley	vacuole	35.24	34.51
TraesCS5B01G383000.1	Wheat	vacuole	35.24	34.51
Zm00001d012366_P001	Maize	vacuole	35.84	34.49
Zm00001d012368_P001	Maize	golgi, vacuole	35.84	34.49
Zm00001d012371_P001	Maize	golgi, vacuole	35.84	34.49
Zm00001d012377_P001	Maize	vacuole	35.84	34.49
TraesCS3A01G298200.1	Wheat	cytosol	32.83	34.38
TraesCS3D01G503900.1	Wheat	nucleus	31.93	34.08
EER96671	Sorghum	endoplasmic reticulum, golgi	35.84	34.0
TraesCS3B01G558800.1	Wheat	cytosol	21.39	33.97
Zm00001d012249_P001	Maize	vacuole	35.24	33.91
CDY66188	Canola	vacuole	33.43	33.84
TraesCS5D01G202700.1	Wheat	vacuole	35.24	33.81
PGSC0003DMT400007661	Potato	vacuole	38.55	33.77
Bra003820.1-P	Field mustard	vacuole	32.83	33.75
Zm00001d012375_P001	Maize	vacuole	34.04	33.73
EES01841	Sorghum	vacuole	35.24	33.72
EES01763	Sorghum	vacuole	34.94	33.62
Zm00001d012252_P001	Maize	vacuole	34.94	33.62
CDX68204	Canola	vacuole	33.13	33.54
TraesCS2D01G076300.1	Wheat	vacuole	34.94	33.53
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	34.94	33.53
KXG39404	Sorghum	golgi, vacuole	34.34	33.43
TraesCS3A01G496700.1	Wheat	golgi, vacuole	34.64	33.33
Os07t0543600-00	Rice	golgi, vacuole	34.94	33.14
TraesCS3D01G303900.1	Wheat	cytosol	31.93	33.12
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	25.3	33.07
TraesCS3B01G559100.1	Wheat	vacuole	34.34	33.04
TraesCS3D01G504000.1	Wheat	vacuole	34.34	33.04
TraesCS7D01G076600.1	Wheat	cytosol	20.78	33.01
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	18.37	32.97
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	34.34	32.95
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	15.96	32.92
TraesCS7D01G075900.1	Wheat	vacuole	34.04	32.75
TraesCS5D01G389100.1	Wheat	plastid, vacuole	34.94	32.68
HORVU7Hr1G028580.1	Barley	golgi, vacuole	34.64	32.67
CDY66189	Canola	vacuole	29.22	32.66
HORVU7Hr1G028550.2	Barley	plastid	17.47	32.58
TraesCS3A01G496900.1	Wheat	vacuole	34.34	32.57
PGSC0003DMT400015199	Potato	vacuole	38.25	32.48
EES05895	Sorghum	golgi, vacuole	33.73	32.37
Os06t0623700-01	Rice	golgi, vacuole	34.04	32.29
TraesCS2B01G281700.1	Wheat	golgi, vacuole	33.43	32.27
TraesCS7B01G040900.1	Wheat	golgi, vacuole	33.73	32.18
TraesCS7D01G139900.1	Wheat	vacuole	33.73	32.18
TraesCS1A01G026500.1	Wheat	vacuole	33.43	32.17
TraesCS7D01G140500.1	Wheat	golgi, vacuole	33.43	32.17
TraesCSU01G223800.1	Wheat	vacuole	33.43	32.17
TraesCS7D01G076500.1	Wheat	cytosol	18.37	32.11
HORVU3Hr1G109810.1	Barley	golgi, vacuole	33.73	32.09
EER90208	Sorghum	vacuole	33.43	32.08
EES07680	Sorghum	golgi, vacuole	33.43	32.08
OQU76676	Sorghum	extracellular, golgi, vacuole	33.43	32.08
Os01t0698200-00	Rice	mitochondrion	28.01	32.07
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	34.34	32.02
TraesCS7D01G076000.1	Wheat	vacuole	32.83	31.96
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	34.34	31.93
TraesCS7B01G040400.1	Wheat	golgi, vacuole	33.43	31.9
EES17427	Sorghum	golgi, vacuole	32.83	31.78
TraesCSU01G240600.1	Wheat	cytosol	18.07	31.75
TraesCSU01G255900.1	Wheat	cytosol	18.07	31.75
EES05427	Sorghum	vacuole	32.83	31.69
OQU87434	Sorghum	golgi, vacuole	33.73	31.64
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	12.95	31.62
TraesCS7D01G140000.1	Wheat	golgi, vacuole	33.13	31.61
TraesCSU01G104000.1	Wheat	golgi, vacuole	33.13	31.61
TraesCS7A01G138300.1	Wheat	cytosol	19.88	31.58
TraesCS7A01G138700.1	Wheat	cytosol	19.88	31.58
OQU85880	Sorghum	golgi, vacuole	32.53	31.21
PGSC0003DMT400007732	Potato	vacuole	36.75	31.2
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	32.23	31.2
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	33.43	31.18
TraesCS7A01G138800.1	Wheat	golgi, vacuole	28.61	31.15
Os08t0442200-01	Rice	extracellular	32.83	31.14
TraesCS7D01G076300.1	Wheat	vacuole	33.73	31.02
OQU79673	Sorghum	vacuole	31.93	30.99
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	28.61	30.94
TraesCS5B01G195400.1	Wheat	vacuole	33.73	30.77
TraesCS1A01G437900.1	Wheat	cytosol	17.17	30.65
TraesCS5A01G188200.1	Wheat	vacuole	33.43	30.58
TraesCS5D01G202800.1	Wheat	golgi, vacuole	33.43	30.49
EER96672	Sorghum	vacuole	33.43	30.33
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	34.34	30.24
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	18.67	30.1
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	30.72	29.91
HORVU5Hr1G058940.2	Barley	vacuole	32.53	29.43
HORVU5Hr1G078340.1	Barley	golgi, vacuole	21.39	29.1
EES17425	Sorghum	extracellular	22.89	29.01
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	35.24	28.75
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	29.82	28.61
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	31.63	28.07
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	31.93	27.75
PGSC0003DMT400005990	Potato	cytosol	21.39	24.57
HORVU4Hr1G016850.1	Barley	cytosol	12.05	22.99
Bra015944.1-P	Field mustard	vacuole	39.16	21.78
PGSC0003DMT400003995	Potato	golgi, vacuole	23.49	20.86
Zm00001d012373_P001	Maize	vacuole	35.84	20.24

Protein Annotations

EntrezGene:102587252	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042	UniProt:M1CAD9
PFAM:PF03088	EnsemblPlantsGene:PGSC0003DMG402024610	PGSC:PGSC0003DMG402024610	EnsemblPlants:PGSC0003DMT400063277	PANTHER:PTHR10426	PANTHER:PTHR10426:SF57
SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI000296ADBD	RefSeq:XP_006345201.1	SEG:seg

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402024610]

Coordinates

chr3:-:54503056..54504655

Molecular Weight (calculated)

36291.7 Da

IEP (calculated)

9.933

GRAVY (calculated)

-0.005

Length

332 amino acids

Sequence
(BLAST)

001: METVSIRKTV LFVQIWVMLN VSPSVALCRF PAFSKLQLPL QTIGPEASAF DRKGGGPYTG IADGRIVKYQ GPRVGFTDFA VTSPNRTKAK CDGKNGPELQ
101: QICGRPFGLG FYYKTGDLYI TDAFYGLVVV GPSGGLVTRV PSFQGRNFAF LDALDIDQRT GVVYFVDSGA IFLTGNTTRI VESGDISGRL FKYDIATKQV
201: TLLLSGLSGP IGVALSKDNS YVLITESIAQ RIRRFWLKGA KANSSDVFAN VDGIPDNIKR TVLGDFWVAI SNTKQRTTFS LGQRINRFGK VVETCNFTAQ
301: YKSPNGITEV QEYKGKLYVG SLDQNFIGVF GV

Best Arabidopsis Sequence Match ( AT1G74000.1 )
(BLAST)

001: MMRSFVSLIS LLLLLSFSSS VLSTKKSSFQ KLPVPGNRTG PEAFAFDSTG KGFYTGVTGG KILKYLPKKG YVDFAQITNS SKSSLCDGAL GTTNVEKCGR
101: PAGIAFNTKT GDLYVADAAL GLHVIPRRGG LAKKIADSVG GKPFLFLDGL DVDPTTGVVY FTSFSSTFGP RDVLKAVATK DSTGKFFKYD PSKKVVTVLM
201: EGLSGSAGCA VSSDGSFVLV GQFTKSNIKR YWIKGSKAGT SEDFTNSVSN PDNIKRIGST GNFWVASVVN SATGPTNPSA VKVSSAGKVL QTIPLKDKFG
301: DTLVSEVNEY KGQLYIGALF GPFAGILKL

Arabidopsis Description

SSL11Protein STRICTOSIDINE SYNTHASE-LIKE 11 [Source:UniProtKB/Swiss-Prot;Acc:P92976]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.