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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 8
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d012252_P001 Maize vacuole 90.2 90.72
Zm00001d012249_P001 Maize vacuole 89.63 90.14
EES01763 Sorghum vacuole 88.18 88.7
OQU87434 Sorghum golgi, vacuole 87.03 85.31
KXG39404 Sorghum golgi, vacuole 75.79 77.13
OQU75879 Sorghum vacuole 65.99 74.84
OQU79673 Sorghum vacuole 57.35 58.19
EES17427 Sorghum golgi, vacuole 54.47 55.1
EES07680 Sorghum golgi, vacuole 51.87 52.02
OQU76676 Sorghum extracellular, golgi, vacuole 51.87 52.02
EER90208 Sorghum vacuole 51.87 52.02
EES05895 Sorghum golgi, vacuole 51.59 51.73
OQU85880 Sorghum golgi, vacuole 51.59 51.73
EER96671 Sorghum endoplasmic reticulum, golgi 51.59 51.14
EES05427 Sorghum vacuole 50.43 50.87
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 44.38 49.68
EER96672 Sorghum vacuole 50.14 47.54
EES17425 Sorghum extracellular 35.73 47.33
GSMUA_Achr5P05340_001 Banana vacuole 47.26 45.68
VIT_10s0042g00010.t01 Wine grape vacuole 40.63 44.76
VIT_13s0074g00070.t01 Wine grape vacuole 34.58 43.8
VIT_00s0575g00010.t01 Wine grape vacuole 39.19 43.59
VIT_10s0071g00020.t01 Wine grape vacuole 38.33 43.04
VIT_10s0042g00020.t01 Wine grape vacuole 39.77 42.86
VIT_00s0575g00020.t01 Wine grape vacuole 39.48 42.55
VIT_10s0042g00050.t01 Wine grape vacuole 39.48 42.55
VIT_13s0074g00080.t01 Wine grape vacuole 39.19 42.24
VIT_10s0071g00010.t01 Wine grape vacuole 38.62 41.61
VIT_10s0071g00250.t01 Wine grape vacuole 40.63 41.47
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 21.33 40.88
VIT_10s0042g00030.t01 Wine grape vacuole 31.99 40.66
PGSC0003DMT400056839 Potato vacuole 36.02 40.06
VIT_17s0000g04600.t01 Wine grape vacuole 38.9 39.36
PGSC0003DMT400063282 Potato extracellular, vacuole 17.58 39.35
KRH07462 Soybean vacuole 38.62 38.62
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 30.26 37.91
Solyc12g039070.1.1 Tomato nucleus 36.31 37.84
KRH45407 Soybean nucleus 37.75 37.54
CDX73037 Canola vacuole 35.16 37.2
AT1G74010.1 Thale cress vacuole 34.01 36.31
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 24.5 36.17
Solyc03g114550.1.1 Tomato vacuole 28.53 36.13
CDX96505 Canola vacuole 34.01 35.98
KRH03206 Soybean vacuole 34.58 35.71
Bra003820.1-P Field mustard vacuole 33.14 35.6
PGSC0003DMT400063277 Potato vacuole 33.72 35.24
Solyc03g114560.2.1 Tomato extracellular 33.14 35.17
Solyc03g114530.2.1 Tomato vacuole 33.43 34.94
KRH56734 Soybean vacuole 34.29 34.8
Solyc03g114540.1.1 Tomato vacuole 33.43 34.52
PGSC0003DMT400063274 Potato vacuole 33.43 34.52
EER90869 Sorghum vacuole 39.19 34.17
CDX68204 Canola vacuole 32.28 34.15
CDY66188 Canola vacuole 32.28 34.15
CDY66189 Canola vacuole 29.11 34.01
CDY47728 Canola vacuole 31.99 33.95
Bra008126.1-P Field mustard vacuole 31.99 33.95
CDY47729 Canola vacuole 31.7 33.85
Bra008127.1-P Field mustard vacuole 31.99 33.84
PGSC0003DMT400063286 Potato vacuole 32.56 33.83
Bra015943.1-P Field mustard vacuole 31.7 33.74
CDX96507 Canola vacuole 31.7 33.74
CDY45861 Canola vacuole 31.99 33.64
Bra008124.1-P Field mustard vacuole 31.41 33.54
KRH54773 Soybean vacuole 32.56 33.53
CDY45863 Canola vacuole 31.12 33.23
EES07950 Sorghum vacuole 37.46 33.16
AT1G74020.1 Thale cress vacuole 31.99 33.13
AT1G74000.1 Thale cress vacuole 31.41 33.13
CDX73039 Canola vacuole 31.12 33.13
KXG27696 Sorghum vacuole 36.89 32.82
CDX96506 Canola vacuole 30.55 32.62
EER92507 Sorghum cytosol, golgi, mitochondrion, vacuole 38.62 32.52
VIT_17s0000g04610.t01 Wine grape vacuole 34.29 32.43
CDX73038 Canola vacuole 30.26 32.31
KRH63133 Soybean peroxisome, vacuole 15.56 31.21
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 39.19 30.02
KXG36676 Sorghum vacuole 27.09 26.11
KXG36678 Sorghum vacuole 25.94 24.46
OQU92210 Sorghum golgi, plastid, vacuole 27.38 21.44
Bra015944.1-P Field mustard vacuole 29.97 17.42
Protein Annotations
Gene3D:2.120.10.30MapMan:50.4.3InterPro:6-blade_b-propeller_TolB-likeEntrezGene:8063114UniProt:C5XRB6EnsemblPlants:EES01841
ProteinID:EES01841ProteinID:EES01841.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0016020GO:GO:0016787GO:GO:0016788GO:GO:0016844InterPro:IPR011042PFAM:PF03088
PANTHER:PTHR10426PANTHER:PTHR10426:SF56EnsemblPlantsGene:SORBI_3003G373200SUPFAM:SSF63829SignalP:SignalP-noTMInterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthaseTMHMM:TMhelixUniParc:UPI0001A84F58RefSeq:XP_002456721.1SEG:seg:
Description
hypothetical protein
Coordinates
chr3:+:68860389..68861489
Molecular Weight (calculated)
36749.6 Da
IEP (calculated)
6.151
GRAVY (calculated)
-0.080
Length
347 amino acids
Sequence
(BLAST)
001: MGGQRLNLTT SSLLAVVVLA LLAAPSAAAA QVKTTDTRWS FRLPLPSGVS GAESLAFDGK GEGPYAGVSD GRVLKWGGSS VGWTTYAHSA NYRKIPLCTA
101: GVLPSTETES LCGRPLGLQF HAKTGDLYIA DAYLGLMRVG PGGGEAEVLA TGSDDGVPFN FVNGLDVDQA TGDVYFTDSS ATYPRRFNTE IMMNADATGR
201: LLRYDARTGG VTVLRSGLPY PNGVAVSRDG AQVVVAHTVP CQAFRYFLRG ARAGQYELLA DLPGYPDNVR RDGKGGYWVA LNQEKQRLDA TSETAPVKHL
301: VGVRLDAQGV EVEELTAAKG VTLSDVAERR GKLWLGSVEL EYVGLVA
Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.