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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • vacuole 5
  • extracellular 2
  • endoplasmic reticulum 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:vacuole
Plant-mPloc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020308_P001 Maize cytosol, plastid, vacuole 39.62 90.06
Zm00001d020307_P001 Maize endoplasmic reticulum, vacuole 45.08 80.1
TraesCS5D01G202800.1 Wheat golgi, vacuole 68.03 68.41
TraesCS5A01G188200.1 Wheat vacuole 67.49 68.04
TraesCS5B01G195400.1 Wheat vacuole 67.21 67.58
HORVU5Hr1G058940.2 Barley vacuole 67.49 67.3
Os09t0374900-00 Rice cytosol, golgi, plastid, vacuole 70.22 67.28
TraesCS7D01G076300.1 Wheat vacuole 63.39 64.27
EER96671 Sorghum endoplasmic reticulum, golgi 54.64 57.14
OQU75879 Sorghum vacuole 43.44 51.96
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 43.72 51.61
KXG39404 Sorghum golgi, vacuole 46.72 50.15
EES01841 Sorghum vacuole 47.54 50.14
GSMUA_Achr5P05340_001 Banana vacuole 48.63 49.58
OQU76676 Sorghum extracellular, golgi, vacuole 45.9 48.55
EES01763 Sorghum vacuole 45.63 48.41
EES05427 Sorghum vacuole 44.54 47.38
OQU87434 Sorghum golgi, vacuole 45.63 47.18
EES07680 Sorghum golgi, vacuole 44.26 46.82
EER90208 Sorghum vacuole 43.99 46.53
EES05895 Sorghum golgi, vacuole 43.99 46.53
OQU85880 Sorghum golgi, vacuole 43.72 46.24
EES17427 Sorghum golgi, vacuole 43.17 46.06
OQU79673 Sorghum vacuole 41.8 44.74
VIT_10s0042g00010.t01 Wine grape vacuole 37.16 43.17
VIT_13s0074g00080.t01 Wine grape vacuole 37.7 42.86
VIT_13s0074g00070.t01 Wine grape vacuole 31.97 42.7
VIT_00s0575g00010.t01 Wine grape vacuole 36.34 42.63
VIT_10s0042g00050.t01 Wine grape vacuole 37.43 42.55
VIT_00s0575g00020.t01 Wine grape vacuole 37.43 42.55
VIT_10s0071g00010.t01 Wine grape vacuole 36.89 41.93
VIT_10s0071g00020.t01 Wine grape vacuole 34.97 41.42
VIT_10s0042g00020.t01 Wine grape vacuole 36.34 41.3
KRH07462 Soybean vacuole 39.07 41.21
VIT_10s0042g00030.t01 Wine grape vacuole 30.6 41.03
KRH45407 Soybean nucleus 38.25 40.11
VIT_10s0071g00250.t01 Wine grape vacuole 36.89 39.71
PGSC0003DMT400056839 Potato vacuole 33.33 39.1
VIT_17s0000g04600.t01 Wine grape vacuole 35.25 37.61
CDX96505 Canola vacuole 33.33 37.2
Solyc12g039070.1.1 Tomato nucleus 33.61 36.94
EER90869 Sorghum vacuole 39.89 36.68
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 23.5 36.6
CDX73037 Canola vacuole 32.79 36.59
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 17.76 35.91
EES17425 Sorghum extracellular 25.68 35.88
Solyc03g114550.1.1 Tomato vacuole 26.5 35.4
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 26.78 35.38
EES07950 Sorghum vacuole 37.7 35.2
KXG27696 Sorghum vacuole 37.43 35.13
KRH03206 Soybean vacuole 32.24 35.12
KRH56734 Soybean vacuole 32.79 35.09
KRH54773 Soybean vacuole 32.24 35.01
AT1G74000.1 Thale cress vacuole 31.15 34.65
EER92507 Sorghum cytosol, golgi, mitochondrion, vacuole 38.25 33.98
AT1G74010.1 Thale cress vacuole 30.05 33.85
CDX96506 Canola vacuole 30.05 33.85
Solyc03g114560.2.1 Tomato extracellular 30.05 33.64
PGSC0003DMT400063282 Potato extracellular, vacuole 14.21 33.55
PGSC0003DMT400063277 Potato vacuole 30.33 33.43
PGSC0003DMT400063274 Potato vacuole 30.6 33.33
CDY47728 Canola vacuole 29.78 33.33
Bra008126.1-P Field mustard vacuole 29.78 33.33
Bra008127.1-P Field mustard vacuole 29.78 33.23
CDX73038 Canola vacuole 29.51 33.23
Solyc03g114530.2.1 Tomato vacuole 30.05 33.13
Bra003820.1-P Field mustard vacuole 29.23 33.13
Solyc03g114540.1.1 Tomato vacuole 30.33 33.04
KRH63133 Soybean peroxisome, vacuole 15.57 32.95
PGSC0003DMT400063286 Potato vacuole 30.05 32.93
CDY47729 Canola vacuole 29.23 32.92
CDX68204 Canola vacuole 29.23 32.62
Bra008124.1-P Field mustard vacuole 28.96 32.62
CDY45863 Canola vacuole 28.96 32.62
CDX73039 Canola vacuole 28.96 32.52
CDY45861 Canola vacuole 29.23 32.42
CDY66188 Canola vacuole 28.96 32.32
AT1G74020.1 Thale cress vacuole 29.51 32.24
CDX96507 Canola vacuole 28.42 31.9
Bra015943.1-P Field mustard vacuole 28.42 31.9
CDY66189 Canola vacuole 25.68 31.65
VIT_17s0000g04610.t01 Wine grape vacuole 31.15 31.06
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 36.61 29.58
KXG36676 Sorghum vacuole 27.6 28.06
KXG36678 Sorghum vacuole 28.14 27.99
OQU92210 Sorghum golgi, plastid, vacuole 27.32 22.57
Bra015944.1-P Field mustard vacuole 29.51 18.09
Protein Annotations
Gene3D:2.120.10.30MapMan:50.4.3InterPro:6-blade_b-propeller_TolB-likeEntrezGene:8065382UniProt:C5XBD3EnsemblPlants:EER96672
ProteinID:EER96672ProteinID:EER96672.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0016020GO:GO:0016787GO:GO:0016788GO:GO:0016844InterPro:IPR011042PFAM:PF03088
PANTHER:PTHR10426PANTHER:PTHR10426:SF31EnsemblPlantsGene:SORBI_3002G186800SUPFAM:SSF63829SignalP:SignalP-noTMInterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthaseUniParc:UPI0001A83AAFRefSeq:XP_002460151.1SEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:57098294..57108200
Molecular Weight (calculated)
39387.8 Da
IEP (calculated)
8.924
GRAVY (calculated)
-0.213
Length
366 amino acids
Sequence
(BLAST)
001: MEPVANAKKC CRPSISTSLQ LLLLLLVQLP SMATCRHKEE MKSIYNVGQR VVPVRLGRPA FGPESLAFDH RGDGPYTGVS NGRVLRWRGR RGWTEFAHNY
101: KHETEAMCAA KKRAASPAES ACGRPLGLQF HRASGDLYYA DAYLGLMRVG RRGGRAEVVA TEAGGATLNF VNGVDVDQET GHVYFTDSSA TYQRSDYIMI
201: ILTGEATGRL LRYDPATNST TVLASGLSFP NGVALSADGA HVVVAETTRC RLLRHWLRGP ATGTTEPFAD LPGYPDNVRR AADAGAGAGG YHYWVALNRD
301: KSWLVNGTTP RSVAAVRVHG ETGAVTEALR GLGNATVSEV VERPGGALWL GSVDTPYVGL LKVDDL
Best Arabidopsis Sequence Match ( AT3G57010.1 )
(BLAST)
001: MPISRRVLTP ITAAPVILAV LCFFFWSSII GPDNLKGTKH VLQDAKTIPL PVDGPESLEF DPQGEGPYVG VTDGRILKWR GEELGWVDFA YTSPHRDNCS
101: SHEVVPSCGR PLGLSFERKT GDLYICDGYF GVMKVGPEGG LAELVVDEAE GRKVMFANQG DIDEEEDIFY FNDSSDTYHF RDVFYVSLSG TKVGRVIRYD
201: MKKKEAKVIM DKLRLPNGLA LSKNGSFVVT CESSTNICHR IWVKGPKSGT NEVFATLPGS PDNIRRTPTG DFWVALHCKK NLFTRAVLIH TWVGRFFMNT
301: MKMETVIHFM NGGKPHGIVV KLSGETGEIL EILEDSEGKT VKYVSEAYET KDGKLWIGSV YWPAVWVLDT SVYDSI
Arabidopsis Description
SSL8Protein STRICTOSIDINE SYNTHASE-LIKE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J7]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.