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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029108_P001 Maize vacuole 88.27 94.95
Zm00001d029111_P001 Maize vacuole 93.26 94.08
Zm00001d029117_P001 Maize vacuole 92.96 93.79
Zm00001d029115_P001 Maize extracellular, vacuole 63.93 93.16
OQU75879 Sorghum vacuole 78.3 87.25
EES01763 Sorghum vacuole 78.89 77.97
TraesCS5B01G382800.1 Wheat vacuole 75.95 75.95
EES01841 Sorghum vacuole 77.13 75.79
TraesCS3A01G256600.1 Wheat vacuole 74.49 75.6
TraesCS5B01G383000.1 Wheat vacuole 74.78 75.22
TraesCS3B01G289800.1 Wheat vacuole 73.31 74.4
HORVU5Hr1G093840.1 Barley vacuole 73.9 74.34
HORVU3Hr1G065520.3 Barley extracellular 70.09 74.22
TraesCS2A01G078000.1 Wheat vacuole 74.49 74.05
TraesCS2D01G076000.1 Wheat golgi, vacuole 74.49 74.05
TraesCS2B01G092900.1 Wheat golgi, vacuole 74.19 73.98
TraesCS2D01G076200.1 Wheat vacuole 74.19 73.76
OQU87434 Sorghum golgi, vacuole 76.54 73.73
TraesCS2B01G093000.1 Wheat golgi, vacuole 73.9 73.47
HORVU2Hr1G012970.2 Barley mitochondrion 75.37 73.43
HORVU6Hr1G026020.1 Barley cytosol 53.37 73.39
HORVU2Hr1G013460.2 Barley golgi, mitochondrion, vacuole 62.17 72.85
HORVU5Hr1G009400.2 Barley cytosol, mitochondrion, plastid, vacuole 29.03 72.79
TraesCS2D01G076400.1 Wheat vacuole 73.02 72.59
TraesCSU01G189700.1 Wheat vacuole 73.02 72.59
TraesCS5D01G389100.1 Wheat plastid, vacuole 75.37 72.39
TraesCS2D01G076300.1 Wheat vacuole 72.14 71.1
TraesCS3D01G256900.1 Wheat mitochondrion, plastid 73.9 70.59
Os01t0698200-00 Rice mitochondrion 59.82 70.34
Os08t0175000-00 Rice golgi, mitochondrion, vacuole 73.31 70.22
Os08t0442200-01 Rice extracellular 63.64 62.0
OQU79673 Sorghum vacuole 62.17 61.99
EES17427 Sorghum golgi, vacuole 59.82 59.48
EES17425 Sorghum extracellular 39.88 51.91
EER90208 Sorghum vacuole 52.49 51.73
EES07680 Sorghum golgi, vacuole 52.49 51.73
EES05895 Sorghum golgi, vacuole 52.2 51.45
OQU85880 Sorghum golgi, vacuole 52.2 51.45
EES05427 Sorghum vacuole 51.32 50.87
OQU76676 Sorghum extracellular, golgi, vacuole 51.32 50.58
EER96671 Sorghum endoplasmic reticulum, golgi 50.73 49.43
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 43.99 48.39
GSMUA_Achr5P05340_001 Banana vacuole 49.56 47.08
EER96672 Sorghum vacuole 50.15 46.72
VIT_10s0042g00010.t01 Wine grape vacuole 43.11 46.67
VIT_13s0074g00070.t01 Wine grape vacuole 36.95 45.99
VIT_00s0575g00010.t01 Wine grape vacuole 41.94 45.83
VIT_10s0071g00020.t01 Wine grape vacuole 41.35 45.63
VIT_10s0042g00020.t01 Wine grape vacuole 42.52 45.03
VIT_10s0042g00050.t01 Wine grape vacuole 42.52 45.03
VIT_00s0575g00020.t01 Wine grape vacuole 42.23 44.72
VIT_13s0074g00080.t01 Wine grape vacuole 42.23 44.72
VIT_10s0071g00010.t01 Wine grape vacuole 41.64 44.1
VIT_10s0042g00030.t01 Wine grape vacuole 34.31 42.86
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 22.58 42.54
KRH07462 Soybean vacuole 40.76 40.06
VIT_10s0071g00250.t01 Wine grape vacuole 39.88 40.0
PGSC0003DMT400056839 Potato vacuole 36.36 39.74
VIT_17s0000g04600.t01 Wine grape vacuole 39.88 39.65
KRH45407 Soybean nucleus 39.88 38.97
PGSC0003DMT400063282 Potato extracellular, vacuole 17.3 38.06
CDX73037 Canola vacuole 35.78 37.2
Solyc12g039070.1.1 Tomato nucleus 36.07 36.94
Solyc03g114550.1.1 Tomato vacuole 29.62 36.86
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 29.91 36.82
KRH03206 Soybean vacuole 35.48 36.01
CDX96505 Canola vacuole 34.6 35.98
KRH54773 Soybean vacuole 35.48 35.91
AT1G74010.1 Thale cress vacuole 34.02 35.69
KRH56734 Soybean vacuole 35.78 35.67
Bra003820.1-P Field mustard vacuole 33.72 35.6
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 24.34 35.32
EER90869 Sorghum vacuole 41.06 35.18
Solyc03g114560.2.1 Tomato extracellular 33.72 35.17
Bra008126.1-P Field mustard vacuole 33.14 34.56
CDY47728 Canola vacuole 33.14 34.56
CDY66188 Canola vacuole 33.14 34.45
AT1G74000.1 Thale cress vacuole 33.14 34.35
PGSC0003DMT400063277 Potato vacuole 33.43 34.34
PGSC0003DMT400063274 Potato vacuole 33.72 34.23
Solyc03g114540.1.1 Tomato vacuole 33.72 34.23
EES07950 Sorghum vacuole 39.3 34.18
Bra008127.1-P Field mustard vacuole 32.84 34.15
CDX68204 Canola vacuole 32.84 34.15
PGSC0003DMT400063286 Potato vacuole 33.43 34.13
Solyc03g114530.2.1 Tomato vacuole 33.14 34.04
CDY66189 Canola vacuole 29.33 33.67
CDY45861 Canola vacuole 32.55 33.64
KXG27696 Sorghum vacuole 38.42 33.59
Bra015943.1-P Field mustard vacuole 31.96 33.44
CDX96507 Canola vacuole 31.96 33.44
AT1G74020.1 Thale cress vacuole 32.84 33.43
CDX96506 Canola vacuole 31.67 33.23
CDY47729 Canola vacuole 31.67 33.23
EER92507 Sorghum cytosol, golgi, mitochondrion, vacuole 39.88 33.01
VIT_17s0000g04610.t01 Wine grape vacuole 35.48 32.97
Bra008124.1-P Field mustard vacuole 31.38 32.92
CDX73038 Canola vacuole 31.38 32.92
CDX73039 Canola vacuole 31.38 32.82
CDY45863 Canola vacuole 31.09 32.62
KRH63133 Soybean peroxisome, vacuole 16.42 32.37
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 41.06 30.91
KXG36676 Sorghum vacuole 26.98 25.56
KXG36678 Sorghum vacuole 26.69 24.73
OQU92210 Sorghum golgi, plastid, vacuole 28.45 21.9
Bra015944.1-P Field mustard vacuole 31.38 17.92
Protein Annotations
Gene3D:2.120.10.30MapMan:50.4.3InterPro:6-blade_b-propeller_TolB-likeUniProt:A0A1B6QNB3GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016844InterPro:IPR011042EnsemblPlants:KXG39404
ProteinID:KXG39404ProteinID:KXG39404.1PFAM:PF03088PANTHER:PTHR10426PANTHER:PTHR10426:SF56EnsemblPlantsGene:SORBI_3001G375500
SUPFAM:SSF63829SignalP:SignalP-noTMInterPro:Strictosidine_synth_cons-regInterPro:Strictosidine_synthaseTMHMM:TMhelixUniParc:UPI00081ACBD1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:-:66394151..66395587
Molecular Weight (calculated)
36696.8 Da
IEP (calculated)
7.030
GRAVY (calculated)
-0.096
Length
341 amino acids
Sequence
(BLAST)
001: MGRMRHTATL LLAVALALLL PASFCAAEPI KTTSTLWSFR LPLPDGVTGA ESLAFDRRGQ GPYAGVSDGR VLKWGGSALG WTTFAHSANY RKMPLCTASV
101: VPSEQTESMC GRPLGLQFYA MTGDLYIADA YMGLMKVGPN GGEAQVLATQ ADGAPFRFAN GLDVDQGTGD VYFTDSSATY PRRFNAEIMM NADATGRLLK
201: YDARTKRVTV LKADLPYPNG VAVSSDRTHV VVAHTVPCQA FRYWLRGPKA GQYELLADLP GYPDNVRRDA RGGYWVALNQ ERARLDATAP PAKHLVGVRL
301: GVDGDAVEEL TAAKGVTLSD VAEKDGQLWL GSVELDYVGL V
Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.