CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05895	Sorghum	golgi, vacuole	67.05	67.05
EES05427	Sorghum	vacuole	66.47	66.86
EES07680	Sorghum	golgi, vacuole	66.19	66.19
EER90208	Sorghum	vacuole	66.19	66.19
OQU85880	Sorghum	golgi, vacuole	66.19	66.19
Os06t0623700-01	Rice	golgi, vacuole	66.19	65.43
OQU75879	Sorghum	vacuole	47.11	53.27
EES01841	Sorghum	vacuole	52.02	51.87
KXG39404	Sorghum	golgi, vacuole	50.58	51.32
EES01763	Sorghum	vacuole	51.16	51.3
EER96671	Sorghum	endoplasmic reticulum, golgi	49.71	49.14
OQU87434	Sorghum	golgi, vacuole	49.71	48.59
OQU79673	Sorghum	vacuole	47.98	48.54
EES17427	Sorghum	golgi, vacuole	47.4	47.81
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	41.62	46.45
EER96672	Sorghum	vacuole	48.55	45.9
GSMUA_Achr5P05340_001	Banana	vacuole	44.51	42.9
VIT_13s0074g00070.t01	Wine grape	vacuole	31.21	39.42
EES17425	Sorghum	extracellular	29.19	38.55
PGSC0003DMT400056839	Potato	vacuole	34.68	38.46
VIT_10s0042g00010.t01	Wine grape	vacuole	34.68	38.1
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	19.65	37.57
VIT_10s0071g00020.t01	Wine grape	vacuole	33.24	37.22
VIT_00s0575g00010.t01	Wine grape	vacuole	33.53	37.18
VIT_10s0042g00030.t01	Wine grape	vacuole	29.19	37.0
VIT_10s0042g00020.t01	Wine grape	vacuole	34.39	36.96
VIT_10s0042g00050.t01	Wine grape	vacuole	34.39	36.96
VIT_10s0071g00010.t01	Wine grape	vacuole	34.1	36.65
VIT_13s0074g00080.t01	Wine grape	vacuole	34.1	36.65
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.57	36.17
VIT_00s0575g00020.t01	Wine grape	vacuole	33.53	36.02
KRH07462	Soybean	vacuole	36.13	36.02
KRH03206	Soybean	vacuole	34.97	36.01
KRH56734	Soybean	vacuole	35.55	35.96
VIT_17s0000g04600.t01	Wine grape	vacuole	35.55	35.86
VIT_10s0071g00250.t01	Wine grape	vacuole	34.68	35.29
KRH45407	Soybean	nucleus	35.55	35.24
Solyc12g039070.1.1	Tomato	nucleus	33.81	35.14
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.03	35.02
PGSC0003DMT400063282	Potato	extracellular, vacuole	15.61	34.84
KRH54773	Soybean	vacuole	33.81	34.72
CDX96505	Canola	vacuole	32.37	34.15
CDX73037	Canola	vacuole	32.37	34.15
Solyc03g114560.2.1	Tomato	extracellular	32.08	33.95
PGSC0003DMT400063274	Potato	vacuole	32.66	33.63
Solyc03g114540.1.1	Tomato	vacuole	32.66	33.63
Solyc03g114550.1.1	Tomato	vacuole	26.59	33.58
PGSC0003DMT400063286	Potato	vacuole	32.37	33.53
Solyc03g114530.2.1	Tomato	vacuole	32.08	33.43
PGSC0003DMT400063277	Potato	vacuole	32.08	33.43
EER90869	Sorghum	vacuole	38.44	33.42
Bra003820.1-P	Field mustard	vacuole	30.06	32.2
AT1G74000.1	Thale cress	vacuole	30.35	31.91
EES07950	Sorghum	vacuole	36.13	31.89
VIT_17s0000g04610.t01	Wine grape	vacuole	33.81	31.88
CDY66189	Canola	vacuole	27.17	31.65
KXG27696	Sorghum	vacuole	35.55	31.54
AT1G74010.1	Thale cress	vacuole	29.48	31.38
CDY47729	Canola	vacuole	29.48	31.38
CDY66188	Canola	vacuole	29.48	31.1
CDX68204	Canola	vacuole	29.48	31.1
Bra008124.1-P	Field mustard	vacuole	29.19	31.08
CDX96506	Canola	vacuole	29.19	31.08
Bra008127.1-P	Field mustard	vacuole	29.19	30.79
CDY45863	Canola	vacuole	28.9	30.77
CDX73038	Canola	vacuole	28.9	30.77
CDX96507	Canola	vacuole	28.9	30.67
Bra015943.1-P	Field mustard	vacuole	28.9	30.67
KRH63133	Soybean	peroxisome, vacuole	15.32	30.64
CDY45861	Canola	vacuole	29.19	30.61
AT1G74020.1	Thale cress	vacuole	29.48	30.45
EER92507	Sorghum	cytosol, golgi, mitochondrion, vacuole	36.13	30.34
CDY47728	Canola	vacuole	28.61	30.28
CDX73039	Canola	vacuole	28.32	30.06
Bra008126.1-P	Field mustard	vacuole	28.32	29.97
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	37.28	28.48
KXG36678	Sorghum	vacuole	26.88	25.27
KXG36676	Sorghum	vacuole	25.72	24.72
OQU92210	Sorghum	golgi, plastid, vacuole	29.48	23.02
Bra015944.1-P	Field mustard	vacuole	28.61	16.58

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A1W0VTT3	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042	EnsemblPlants:OQU76676
ProteinID:OQU76676	ProteinID:OQU76676.1	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	EnsemblPlantsGene:SORBI_3010G184400
SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0009DC91CF
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:52416654..52417700

Molecular Weight (calculated)

36156.2 Da

IEP (calculated)

8.953

GRAVY (calculated)

-0.111

Length

346 amino acids

Sequence
(BLAST)

001: MGRRTSVVLA LLVIALSLLL LLPSAAAAAV AKAIDASKVQ RLELPDSLVG PESVAFDGRG AGPYVSVADG RVLRWGGSGN GSGSGWTTYT PSYAKNGCAA
101: PSEIPPVATE SSCGRPLGLR FHRRSGTLYV ADAYMGLMKV GPGGGEATVL ATEAGGEPLR FTNGVDVDQR TGEVYFTDSS STYRRSQHQM VTATGDSTGR
201: IMRYDPGTGQ VAVLASGVTY PNGVAVSADG THLVVALTGP CKLLRYWLRG AKAGTSETLA DLPGYPDNVR PDGKGGYWVA LHREKNELPF GGVNSHLVGV
301: RIGADGETLQ EMKGPKNVRP TELVERKGGK IYMGSVELSY VGIVSP

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.