CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07462	Soybean	vacuole	93.98	94.52
VIT_13s0074g00070.t01	Wine grape	vacuole	44.41	56.57
VIT_10s0042g00030.t01	Wine grape	vacuole	42.12	53.85
VIT_13s0074g00080.t01	Wine grape	vacuole	49.28	53.42
VIT_10s0071g00020.t01	Wine grape	vacuole	47.28	53.4
VIT_00s0575g00010.t01	Wine grape	vacuole	47.56	53.21
VIT_10s0042g00010.t01	Wine grape	vacuole	47.85	53.02
VIT_10s0042g00020.t01	Wine grape	vacuole	48.42	52.48
VIT_10s0042g00050.t01	Wine grape	vacuole	48.42	52.48
VIT_00s0575g00020.t01	Wine grape	vacuole	48.14	52.17
VIT_10s0071g00010.t01	Wine grape	vacuole	48.14	52.17
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.55	49.03
VIT_10s0071g00250.t01	Wine grape	vacuole	47.56	48.82
GSMUA_Achr5P05340_001	Banana	vacuole	44.7	43.45
Zm00001d029115_P001	Maize	extracellular, vacuole	27.79	41.45
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	17.19	41.1
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	18.91	40.99
KRG95135	Soybean	endoplasmic reticulum	42.98	40.43
HORVU6Hr1G026020.1	Barley	cytosol	28.65	40.32
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	33.52	40.21
OQU75879	Sorghum	vacuole	35.24	40.2
KXG39404	Sorghum	golgi, vacuole	38.97	39.88
TraesCS5B01G383000.1	Wheat	vacuole	38.68	39.82
TraesCS5B01G382800.1	Wheat	vacuole	38.68	39.59
TraesCS3A01G256600.1	Wheat	vacuole	38.11	39.58
Zm00001d012249_P001	Maize	vacuole	38.97	39.42
TraesCS2D01G076200.1	Wheat	vacuole	38.68	39.36
KRH66809	Soybean	endoplasmic reticulum	41.83	39.35
Zm00001d029111_P001	Maize	vacuole	38.11	39.35
TraesCS3B01G289800.1	Wheat	vacuole	37.82	39.29
TraesCS2B01G092900.1	Wheat	golgi, vacuole	38.4	39.18
EES01763	Sorghum	vacuole	38.68	39.13
HORVU3Hr1G065520.3	Barley	extracellular	36.1	39.13
Zm00001d012252_P001	Maize	vacuole	38.68	39.13
TraesCS2A01G078000.1	Wheat	vacuole	38.4	39.07
TraesCS2B01G093000.1	Wheat	golgi, vacuole	38.4	39.07
Zm00001d029117_P001	Maize	vacuole	37.82	39.05
HORVU2Hr1G012970.2	Barley	mitochondrion	38.97	38.86
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	22.92	38.84
TraesCS2D01G076000.1	Wheat	golgi, vacuole	38.11	38.78
Zm00001d012377_P001	Maize	vacuole	38.11	38.55
Zm00001d029108_P001	Maize	vacuole	34.96	38.49
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	37.82	38.48
HORVU5Hr1G093840.1	Barley	vacuole	37.25	38.35
Zm00001d012366_P001	Maize	vacuole	37.82	38.26
Zm00001d012368_P001	Maize	golgi, vacuole	37.82	38.26
Zm00001d012371_P001	Maize	golgi, vacuole	37.82	38.26
EER96672	Sorghum	vacuole	40.11	38.25
TraesCS2D01G076400.1	Wheat	vacuole	37.54	38.19
TraesCSU01G189700.1	Wheat	vacuole	37.54	38.19
OQU87434	Sorghum	golgi, vacuole	38.68	38.14
TraesCS5D01G389100.1	Wheat	plastid, vacuole	38.68	38.03
Os01t0698200-00	Rice	mitochondrion	31.52	37.93
TraesCS2D01G076300.1	Wheat	vacuole	37.54	37.86
EES01841	Sorghum	vacuole	37.54	37.75
Os07t0543600-00	Rice	golgi, vacuole	37.82	37.71
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	37.25	37.57
TraesCS3A01G298200.1	Wheat	cytosol	34.1	37.54
TraesCS3A01G496700.1	Wheat	golgi, vacuole	36.96	37.39
TraesCS3D01G504000.1	Wheat	vacuole	36.96	37.39
Zm00001d012375_P001	Maize	vacuole	35.82	37.31
HORVU5Hr1G078340.1	Barley	golgi, vacuole	26.07	37.3
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.96	37.28
TraesCS5D01G202700.1	Wheat	vacuole	36.96	37.28
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	38.11	37.25
KRH03206	Soybean	vacuole	35.82	37.2
EER96671	Sorghum	endoplasmic reticulum, golgi	37.25	37.14
KRH56734	Soybean	vacuole	36.39	37.13
TraesCS3B01G559100.1	Wheat	vacuole	36.68	37.1
KRH54773	Soybean	vacuole	35.82	37.09
TraesCS3D01G503900.1	Wheat	nucleus	32.95	36.98
KRH66810	Soybean	vacuole	40.4	36.91
TraesCS3D01G303900.1	Wheat	cytosol	33.81	36.88
TraesCS3A01G496900.1	Wheat	vacuole	36.96	36.86
TraesCS7D01G076300.1	Wheat	vacuole	38.11	36.84
TraesCS5D01G202800.1	Wheat	golgi, vacuole	38.4	36.81
TraesCS5B01G195400.1	Wheat	vacuole	38.11	36.54
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	37.25	36.52
HORVU3Hr1G109810.1	Barley	golgi, vacuole	36.39	36.39
TraesCS3B01G559000.1	Wheat	cytosol	19.48	36.36
TraesCS7D01G076000.1	Wheat	vacuole	35.53	36.36
OQU79673	Sorghum	vacuole	35.53	36.26
TraesCS1A01G026500.1	Wheat	vacuole	35.82	36.23
TraesCS7D01G075900.1	Wheat	vacuole	35.82	36.23
EES17427	Sorghum	golgi, vacuole	35.53	36.15
TraesCS5A01G188200.1	Wheat	vacuole	37.54	36.09
HORVU7Hr1G028550.2	Barley	plastid	18.34	35.96
TraesCSU01G223800.1	Wheat	vacuole	35.53	35.94
Os06t0623700-01	Rice	golgi, vacuole	35.82	35.71
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	34.96	35.57
OQU76676	Sorghum	extracellular, golgi, vacuole	35.24	35.55
EES05427	Sorghum	vacuole	34.96	35.47
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	25.79	35.43
HORVU5Hr1G058940.2	Barley	vacuole	37.25	35.42
TraesCS7D01G140500.1	Wheat	golgi, vacuole	34.96	35.36
EES05895	Sorghum	golgi, vacuole	34.96	35.26
TraesCS2B01G281700.1	Wheat	golgi, vacuole	34.67	35.17
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	38.4	35.08
TraesCS7B01G040900.1	Wheat	golgi, vacuole	34.96	35.06
TraesCS7D01G139900.1	Wheat	vacuole	34.96	35.06
EER90208	Sorghum	vacuole	34.67	34.97
EES07680	Sorghum	golgi, vacuole	34.67	34.97
TraesCS3B01G558800.1	Wheat	cytosol	20.92	34.93
TraesCS7A01G138300.1	Wheat	cytosol	20.92	34.93
TraesCS7A01G138700.1	Wheat	cytosol	20.92	34.93
TraesCS7D01G140000.1	Wheat	golgi, vacuole	34.67	34.77
TraesCSU01G104000.1	Wheat	golgi, vacuole	34.67	34.77
OQU85880	Sorghum	golgi, vacuole	34.38	34.68
TraesCS7B01G040400.1	Wheat	golgi, vacuole	34.38	34.48
HORVU7Hr1G028580.1	Barley	golgi, vacuole	34.67	34.38
Os08t0442200-01	Rice	extracellular	34.38	34.29
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	18.05	34.05
TraesCSU01G240600.1	Wheat	cytosol	18.34	33.86
TraesCS7A01G138800.1	Wheat	golgi, vacuole	29.51	33.77
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	36.39	33.69
KRH23218	Soybean	golgi, vacuole	39.54	33.66
KRH63133	Soybean	peroxisome, vacuole	16.62	33.53
TraesCS7D01G076600.1	Wheat	cytosol	20.06	33.49
TraesCSU01G255900.1	Wheat	cytosol	18.05	33.33
KRH10120	Soybean	endoplasmic reticulum	38.97	33.17
KRH26734	Soybean	vacuole	34.38	32.88
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	33.52	32.87
TraesCS7D01G076500.1	Wheat	cytosol	17.77	32.63
TraesCS1A01G437900.1	Wheat	cytosol	16.91	31.72
EES17425	Sorghum	extracellular	23.78	31.68
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	27.79	31.6
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	33.81	31.55
KRH22599	Soybean	vacuole	34.38	31.17
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	30.37	30.64
KRH56180	Soybean	endoplasmic reticulum	38.68	30.61
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	11.46	29.41
HORVU4Hr1G016850.1	Barley	cytosol	12.89	25.86
KRH69688	Soybean	golgi, vacuole	23.78	22.62
Zm00001d012373_P001	Maize	vacuole	37.82	22.45
KRH69689	Soybean	plastid	24.36	21.46
KRH37504	Soybean	vacuole	21.78	21.23
KRH07935	Soybean	endoplasmic reticulum	22.92	21.16
KRH37503	Soybean	vacuole	16.91	18.79

Protein Annotations

EntrezGene:100781971	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EMBL:ACUP02005210	EnsemblPlantsGene:GLYMA_08G269600
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016787
GO:GO:0016788	GO:GO:0016844	UniProt:I1KX07	InterPro:IPR011042	EnsemblPlants:KRH45407	ProteinID:KRH45407
ProteinID:KRH45407.1	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF33	SUPFAM:SSF63829	SignalP:SignalP-noTM
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0002338402	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:34737456..34745250

Molecular Weight (calculated)

38735.4 Da

IEP (calculated)

7.967

GRAVY (calculated)

-0.149

Length

349 amino acids

Sequence
(BLAST)

001: MKQSTLFLFL FLFPLVHALS YEAAYIRDGL KSYSQLDLPH SVFGSESVAF DCHGKGPYVG VSDGRILKWQ ETKREWIDFA VTSPHRNKKL CDGLQNDKME
101: SMCGRPLGLK FNTVTCELYI ADAYFGLLVV GPSGGVAKQL ATSAEGVPFR FTNALDIDTK TGEVYFTDSS ILFQRRVYIS IILSGDRTGR LLKYVPSTQS
201: VHVLVKGLAF PNGVALSKDN SFILVAESTT FKILKIQLRD SKTNNNNNIE PFAQVPRSPD NIKRNNKGEF WVAQNSGRGL IQKLGNEIET TLPWNADPVA
301: IKFDEKGRAI VVLDGEYGRQ LDSVSEVEEH EGSLWIGSAV QPFIGLIKA

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.