Factsheet for TraesCS5D01G389100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

plastid 3
vacuole 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	mitochondrion, plastid, vacuole
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G383000.1	Wheat	vacuole	92.11	96.46
TraesCS5B01G382800.1	Wheat	vacuole	92.39	96.19
HORVU5Hr1G093840.1	Barley	vacuole	90.99	95.28
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	89.86	89.36
Zm00001d029115_P001	Maize	extracellular, vacuole	54.37	82.48
Zm00001d029117_P001	Maize	vacuole	73.8	77.51
Zm00001d029111_P001	Maize	vacuole	73.8	77.51
Zm00001d029108_P001	Maize	vacuole	69.01	77.29
KXG39404	Sorghum	golgi, vacuole	72.39	75.37
Os01t0698200-00	Rice	mitochondrion	60.85	74.48
OQU75879	Sorghum	vacuole	63.38	73.53
TraesCS2D01G076200.1	Wheat	vacuole	68.45	70.85
TraesCS2D01G076400.1	Wheat	vacuole	68.45	70.85
TraesCS2D01G076000.1	Wheat	golgi, vacuole	68.17	70.55
TraesCS2D01G076300.1	Wheat	vacuole	65.35	67.05
TraesCS7D01G076600.1	Wheat	cytosol	30.99	52.63
TraesCS7D01G076500.1	Wheat	cytosol	27.89	52.11
TraesCS3D01G503900.1	Wheat	nucleus	44.79	51.13
TraesCS3D01G504000.1	Wheat	vacuole	49.01	50.43
TraesCS7D01G075900.1	Wheat	vacuole	48.17	49.57
TraesCS5D01G202700.1	Wheat	vacuole	48.17	49.42
TraesCS3D01G303900.1	Wheat	cytosol	44.23	49.06
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	42.25	48.39
TraesCS7D01G139900.1	Wheat	vacuole	47.32	48.28
TraesCS7D01G140000.1	Wheat	golgi, vacuole	47.04	47.99
TraesCS7D01G140500.1	Wheat	golgi, vacuole	46.2	47.54
TraesCS7D01G076000.1	Wheat	vacuole	45.35	47.21
VIT_10s0042g00010.t01	Wine grape	vacuole	41.69	46.98
VIT_00s0575g00010.t01	Wine grape	vacuole	40.56	46.15
VIT_13s0074g00070.t01	Wine grape	vacuole	35.49	45.99
VIT_10s0042g00020.t01	Wine grape	vacuole	41.41	45.65
VIT_10s0071g00020.t01	Wine grape	vacuole	39.72	45.63
GSMUA_Achr5P05340_001	Banana	vacuole	45.63	45.13
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	38.87	44.95
TraesCS5D01G202800.1	Wheat	golgi, vacuole	45.92	44.78
VIT_00s0575g00020.t01	Wine grape	vacuole	40.56	44.72
VIT_10s0042g00050.t01	Wine grape	vacuole	40.56	44.72
VIT_13s0074g00080.t01	Wine grape	vacuole	40.28	44.41
VIT_10s0071g00010.t01	Wine grape	vacuole	40.0	44.1
VIT_10s0042g00030.t01	Wine grape	vacuole	33.24	43.22
TraesCS7D01G076300.1	Wheat	vacuole	43.38	42.66
VIT_17s0000g04600.t01	Wine grape	vacuole	38.31	39.65
KRH07462	Soybean	vacuole	38.59	39.48
VIT_10s0071g00250.t01	Wine grape	vacuole	37.18	38.82
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	25.63	38.72
KRH45407	Soybean	nucleus	38.03	38.68
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	19.72	38.67
Bra003820.1-P	Field mustard	vacuole	34.08	37.46
AT1G74010.1	Thale cress	vacuole	34.08	37.23
Bra008127.1-P	Field mustard	vacuole	33.52	36.28
CDX73037	Canola	vacuole	33.52	36.28
PGSC0003DMT400056839	Potato	vacuole	31.83	36.22
Solyc03g114550.1.1	Tomato	vacuole	27.89	36.13
PGSC0003DMT400063282	Potato	extracellular, vacuole	15.77	36.13
CDY66189	Canola	vacuole	30.14	36.03
Solyc03g114560.2.1	Tomato	extracellular	32.96	35.78
CDY45861	Canola	vacuole	33.24	35.76
CDY47729	Canola	vacuole	32.68	35.69
KRH54773	Soybean	vacuole	33.8	35.61
TraesCS5D01G400000.1	Wheat	golgi	39.72	35.43
KRH03206	Soybean	vacuole	33.52	35.42
PGSC0003DMT400063274	Potato	vacuole	33.52	35.42
Bra008124.1-P	Field mustard	vacuole	32.39	35.38
CDX96506	Canola	vacuole	32.39	35.38
PGSC0003DMT400063286	Potato	vacuole	33.24	35.33
CDY47728	Canola	vacuole	32.39	35.17
Bra008126.1-P	Field mustard	vacuole	32.39	35.17
Solyc03g114540.1.1	Tomato	vacuole	33.24	35.12
CDY45863	Canola	vacuole	32.11	35.08
CDX73038	Canola	vacuole	32.11	35.08
CDX68204	Canola	vacuole	32.39	35.06
CDX96505	Canola	vacuole	32.39	35.06
CDY66188	Canola	vacuole	32.39	35.06
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	27.32	35.02
PGSC0003DMT400063277	Potato	vacuole	32.68	34.94
AT1G74020.1	Thale cress	vacuole	32.96	34.93
KRH56734	Soybean	vacuole	33.52	34.8
CDX96507	Canola	vacuole	31.55	34.36
Bra015943.1-P	Field mustard	vacuole	31.55	34.36
Solyc03g114530.2.1	Tomato	vacuole	32.11	34.34
AT1G74000.1	Thale cress	vacuole	31.55	34.04
Solyc12g039070.1.1	Tomato	nucleus	31.83	33.93
CDX73039	Canola	vacuole	30.99	33.74
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	39.15	33.66
KRH63133	Soybean	peroxisome, vacuole	16.34	33.53
VIT_17s0000g04610.t01	Wine grape	vacuole	33.8	32.7
TraesCS5D01G139700.1	Wheat	vacuole	34.08	32.44
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	38.31	30.02
TraesCS2D01G177900.2	Wheat	golgi	27.04	26.3
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	26.76	25.89
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	26.48	25.61
Bra015944.1-P	Field mustard	vacuole	31.27	18.59

Protein Annotations

EnsemblPlants:TraesCS5D01G389100.1	EnsemblPlantsGene:TraesCS5D01G389100	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	PFscan:PS51257	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:

Description

No Description!

Coordinates

chr5D:-:458458414..458459667

Molecular Weight (calculated)

38371.8 Da

IEP (calculated)

6.928

GRAVY (calculated)

-0.109

Length

355 amino acids

Sequence
(BLAST)

001: MEVRATIFRA EPPTTTMTMG RNLAAILLVV LACLVSLASA EQIKTTNTRW SYRLPLPEGV SGAESLAFSG KDGVYTGVSD GRVLKWGGSA AGWSTFAYNA
101: NYRKIPLCSD SGVPSEQKES ICGRPLGVRF NRKTGELFIA DAYMGLMKVG PDGGEAQVLA TEADGVPFHF LNGLDVDQAT GDVYFTDSSA NYPRRFNTEI
201: IMNADATGRL LKYDARTKLV TVLKAELPYP NGVALSRDRT HVVVAHTVPC EAFRYWLKGP KAGRYELLAD LPGYPDNVRR DGQGGFWVAL NQEKARLNAT
301: AAAPAKHLVG VRLSADGVEV EELTAARGVT LSEVAENGNK LWLGSVELDY IGIFA

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.