Factsheet for VIT_17s0000g04610.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

cytosol 1
vacuole 4
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	vacuole
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0074g00070.t01	Wine grape	vacuole	35.97	48.18
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	23.43	47.51
VIT_10s0042g00030.t01	Wine grape	vacuole	34.88	46.89
VIT_10s0042g00010.t01	Wine grape	vacuole	38.96	45.4
VIT_10s0071g00020.t01	Wine grape	vacuole	38.15	45.31
VIT_00s0575g00010.t01	Wine grape	vacuole	37.87	44.55
VIT_10s0042g00020.t01	Wine grape	vacuole	38.96	44.41
VIT_10s0042g00050.t01	Wine grape	vacuole	38.96	44.41
VIT_10s0071g00010.t01	Wine grape	vacuole	38.69	44.1
VIT_13s0074g00080.t01	Wine grape	vacuole	38.69	44.1
VIT_00s0575g00020.t01	Wine grape	vacuole	38.42	43.79
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	35.42	41.94
VIT_17s0000g04600.t01	Wine grape	vacuole	38.96	41.69
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	15.8	39.73
Zm00001d029115_P001	Maize	extracellular, vacuole	25.07	39.32
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	30.52	38.49
VIT_10s0071g00250.t01	Wine grape	vacuole	35.15	37.94
TraesCS3A01G298200.1	Wheat	cytosol	32.7	37.85
VIT_08s0007g05360.t01	Wine grape	vacuole	38.42	37.3
Os07t0543600-00	Rice	golgi, vacuole	35.42	37.14
GSMUA_Achr5P05340_001	Banana	vacuole	36.24	37.05
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	36.78	36.49
OQU75879	Sorghum	vacuole	30.25	36.27
TraesCS3D01G303900.1	Wheat	cytosol	31.61	36.25
TraesCS2B01G093000.1	Wheat	golgi, vacuole	33.79	36.15
TraesCS2D01G076200.1	Wheat	vacuole	33.79	36.15
TraesCS2B01G092900.1	Wheat	golgi, vacuole	33.52	35.96
EES01763	Sorghum	vacuole	33.79	35.94
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	20.16	35.92
VIT_06s0009g00850.t01	Wine grape	cytosol	34.33	35.9
TraesCS2D01G076300.1	Wheat	vacuole	33.79	35.84
Zm00001d029111_P001	Maize	vacuole	32.97	35.8
Zm00001d029117_P001	Maize	vacuole	32.97	35.8
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	44.14	35.76
TraesCS2A01G078000.1	Wheat	vacuole	33.24	35.57
TraesCS2D01G076000.1	Wheat	golgi, vacuole	33.24	35.57
TraesCS2D01G076400.1	Wheat	vacuole	33.24	35.57
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	33.24	35.57
TraesCSU01G189700.1	Wheat	vacuole	33.24	35.57
EES05895	Sorghum	golgi, vacuole	33.52	35.55
KXG39404	Sorghum	golgi, vacuole	32.97	35.48
TraesCS5B01G382800.1	Wheat	vacuole	32.97	35.48
TraesCS2B01G281700.1	Wheat	golgi, vacuole	33.24	35.47
TraesCS5B01G383000.1	Wheat	vacuole	32.7	35.4
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	34.33	35.39
TraesCS3B01G559000.1	Wheat	cytosol	17.98	35.29
EER90208	Sorghum	vacuole	33.24	35.26
EES07680	Sorghum	golgi, vacuole	33.24	35.26
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	33.24	35.26
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.24	35.26
HORVU2Hr1G012970.2	Barley	mitochondrion	33.52	35.14
HORVU5Hr1G093840.1	Barley	vacuole	32.43	35.1
HORVU3Hr1G065520.3	Barley	extracellular	30.79	35.09
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	24.25	35.04
OQU85880	Sorghum	golgi, vacuole	32.97	34.97
TraesCS5D01G202700.1	Wheat	vacuole	32.97	34.97
EES05427	Sorghum	vacuole	32.7	34.88
TraesCS3B01G289800.1	Wheat	vacuole	31.88	34.82
Zm00001d012366_P001	Maize	vacuole	32.7	34.78
Zm00001d012368_P001	Maize	golgi, vacuole	32.7	34.78
Zm00001d012371_P001	Maize	golgi, vacuole	32.7	34.78
Zm00001d012377_P001	Maize	vacuole	32.7	34.78
HORVU6Hr1G026020.1	Barley	cytosol	23.43	34.68
TraesCS3A01G496700.1	Wheat	golgi, vacuole	32.43	34.49
TraesCS3D01G504000.1	Wheat	vacuole	32.43	34.49
TraesCS7D01G140500.1	Wheat	golgi, vacuole	32.43	34.49
Zm00001d012252_P001	Maize	vacuole	32.43	34.49
Zm00001d029108_P001	Maize	vacuole	29.7	34.38
EES01841	Sorghum	vacuole	32.43	34.29
HORVU7Hr1G028550.2	Barley	plastid	16.62	34.27
TraesCS3B01G559100.1	Wheat	vacuole	32.15	34.2
Zm00001d012249_P001	Maize	vacuole	32.15	34.2
TraesCS7B01G040900.1	Wheat	golgi, vacuole	32.43	34.2
TraesCS7D01G139900.1	Wheat	vacuole	32.43	34.2
Zm00001d012375_P001	Maize	vacuole	31.06	34.03
TraesCS3A01G256600.1	Wheat	vacuole	31.06	33.93
OQU76676	Sorghum	extracellular, golgi, vacuole	31.88	33.81
TraesCS5D01G389100.1	Wheat	plastid, vacuole	32.7	33.8
TraesCS3D01G503900.1	Wheat	nucleus	28.61	33.76
TraesCS3A01G496900.1	Wheat	vacuole	32.15	33.71
TraesCS7D01G075900.1	Wheat	vacuole	31.61	33.62
TraesCS7B01G040400.1	Wheat	golgi, vacuole	31.88	33.62
TraesCS7D01G140000.1	Wheat	golgi, vacuole	31.88	33.62
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	31.34	33.53
HORVU7Hr1G028580.1	Barley	golgi, vacuole	32.15	33.52
Os01t0698200-00	Rice	mitochondrion	26.43	33.45
Os08t0442200-01	Rice	extracellular	31.88	33.43
OQU87434	Sorghum	golgi, vacuole	32.15	33.33
TraesCS1A01G026500.1	Wheat	vacuole	31.34	33.33
HORVU3Hr1G109810.1	Barley	golgi, vacuole	31.61	33.24
EER96671	Sorghum	endoplasmic reticulum, golgi	31.61	33.14
TraesCS7D01G076000.1	Wheat	vacuole	30.79	33.14
TraesCSU01G104000.1	Wheat	golgi, vacuole	31.34	33.05
TraesCSU01G223800.1	Wheat	vacuole	31.06	33.04
TraesCS3B01G558800.1	Wheat	cytosol	18.8	33.01
TraesCS7A01G138300.1	Wheat	cytosol	18.8	33.01
TraesCS7A01G138700.1	Wheat	cytosol	18.8	33.01
TraesCS5B01G195400.1	Wheat	vacuole	32.7	32.97
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	31.88	32.87
EES17427	Sorghum	golgi, vacuole	30.52	32.65
HORVU5Hr1G058940.2	Barley	vacuole	32.43	32.43
TraesCS5D01G202800.1	Wheat	golgi, vacuole	32.15	32.42
TraesCS7D01G076300.1	Wheat	vacuole	31.88	32.41
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	30.52	32.37
Os06t0623700-01	Rice	golgi, vacuole	30.79	32.29
TraesCS5A01G188200.1	Wheat	vacuole	31.88	32.23
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	31.34	32.21
OQU79673	Sorghum	vacuole	29.97	32.16
TraesCS7A01G138800.1	Wheat	golgi, vacuole	26.7	32.13
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	32.7	32.09
HORVU5Hr1G078340.1	Barley	golgi, vacuole	21.25	31.97
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	26.7	31.92
TraesCS7D01G076600.1	Wheat	cytosol	17.98	31.58
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	15.8	31.35
EER96672	Sorghum	vacuole	31.06	31.15
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	31.61	30.77
TraesCS1A01G437900.1	Wheat	cytosol	15.53	30.65
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	33.52	30.3
EES17425	Sorghum	extracellular	21.25	29.77
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	30.25	29.06
TraesCSU01G240600.1	Wheat	cytosol	14.71	28.57
TraesCSU01G255900.1	Wheat	cytosol	14.71	28.57
TraesCS7D01G076500.1	Wheat	cytosol	14.71	28.42
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	12.26	27.95
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	9.26	25.0
VIT_04s0210g00060.t01	Wine grape	cytosol, mitochondrion	17.71	24.16
HORVU4Hr1G016850.1	Barley	cytosol	11.17	23.56
VIT_04s0210g00130.t01	Wine grape	plasma membrane, vacuole	17.98	23.08
VIT_04s0210g00090.t01	Wine grape	mitochondrion, vacuole	12.26	22.96
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	21.8	21.92
VIT_04s0210g00120.t01	Wine grape	vacuole	21.8	21.11
VIT_11s0016g00880.t01	Wine grape	plastid	20.98	20.92
VIT_04s0210g00080.t01	Wine grape	vacuole	21.53	20.84
VIT_04s0210g00050.t01	Wine grape	plastid	23.16	20.38
Zm00001d012373_P001	Maize	vacuole	32.15	20.07
VIT_04s0210g00100.t01	Wine grape	cytosol	8.99	18.86
VIT_04s0210g00040.t01	Wine grape	cytosol, peroxisome, vacuole	18.53	18.13
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	21.53	17.14
VIT_04s0210g00030.t01	Wine grape	vacuole	23.16	11.0

Protein Annotations

EntrezGene:100250762	wikigene:100250762	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EMBL:AM427134
ProteinID:CAN77942	ProteinID:CAN77942.1	ProteinID:CCB43169	ProteinID:CCB43169.1	UniProt:F6GTG0	EMBL:FN594950
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	EntrezGene:LOC100250762	wikigene:LOC100250762
PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF33	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase
TMHMM:TMhelix	UniParc:UPI000210AC19	ArrayExpress:VIT_17s0000g04610	EnsemblPlantsGene:VIT_17s0000g04610	EnsemblPlants:VIT_17s0000g04610.t01	unigene:Vvi.11186
RefSeq:XP_002270060	RefSeq:XP_002270060.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr17:+:4822168..4826327

Molecular Weight (calculated)

39791.2 Da

IEP (calculated)

4.416

GRAVY (calculated)

0.078

Length

367 amino acids

Sequence
(BLAST)

001: MDLYSASVED FETYHSKDIL ATSILTMLVM LSIFLSIFLS FYSQLHLSSG EHVTYKAQFL ERLPLPATGP ESIAFDAAGG GPYTGISDGR ILKYVNGSVG
101: FVEFAITSSN SSEEFCVGNG SVALDFTCGR PFGLGFHYQT GDLYIADAYY GLMVVGPNGG VATQLANAAD GVPFGFTNAL DVDTETGMVY LVDYSSQFSV
201: NEFSVSLQAH DMTGRLMKYD PESKELTVLL GGLGGAAGMA ISKDGSFILI TETVTKRIRK FWLQGPKATT SEILKEFTVR PANIKRNEEG EFWVAFLVAD
301: ETGSCPSQQQ SPGLRISGDG MILEAISLDT QSGISEVAVY NGKMYIGSPF LHFVDVYAWA SECHRRE

Best Arabidopsis Sequence Match ( AT1G74010.1 )
(BLAST)

001: MASFVFVISL LLLSFSSAVF SDDASFQKLP VPDKRSGPES FAFDSTGGFY TGVSGGKILK YVPGKGYVDF AQITDSSNSA WCNGALGTAF AGKCGRPAGI
101: ALNSKTGDLY VADAPLGLHV ISPAGGLATK LADSVDGKPF KFLDGLDVDP TTGVVYFTSF SSKFGPREVL IAVGLKDASG KLFKYDPATK AVTELMEGLS
201: GAAGCAVSSD GSFVLVSEFI KSNIKKYWIK GPKAGTIEDF SSLVSNPDNI RRVGSTGNFW VASVVNKVVM PTDPRAVKLD ANGKVLQTIF LKNEFGNTLL
301: SEVNEFNGHL YIGTLTGPFA GVMKL

Arabidopsis Description

At1g74010 [Source:UniProtKB/TrEMBL;Acc:Q9C9C2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.