Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G138300.1 | Wheat | cytosol | 67.2 | 59.81 |
| TraesCS7A01G138700.1 | Wheat | cytosol | 66.67 | 59.33 |
| TraesCS3A01G496700.1 | Wheat | golgi, vacuole | 76.88 | 41.45 |
| TraesCS3A01G496900.1 | Wheat | vacuole | 77.42 | 41.14 |
| TraesCS1A01G026500.1 | Wheat | vacuole | 75.27 | 40.58 |
| TraesCS3A01G298200.1 | Wheat | cytosol | 67.74 | 39.75 |
| EER90208 | Sorghum | vacuole | 66.13 | 35.55 |
| OQU85880 | Sorghum | golgi, vacuole | 66.13 | 35.55 |
| EES07680 | Sorghum | golgi, vacuole | 66.13 | 35.55 |
| EES05895 | Sorghum | golgi, vacuole | 65.59 | 35.26 |
| TraesCS7A01G138800.1 | Wheat | golgi, vacuole | 57.53 | 35.08 |
| EES05427 | Sorghum | vacuole | 63.44 | 34.3 |
| Os07t0543600-00 | Rice | golgi, vacuole | 62.9 | 33.43 |
| TraesCS2A01G260200.1 | Wheat | mitochondrion, vacuole | 58.06 | 31.21 |
| TraesCS3A01G256600.1 | Wheat | vacuole | 45.7 | 25.3 |
| GSMUA_Achr3P06240_001 | Banana | cytosol, mitochondrion, peroxisome, vacuole | 40.86 | 24.52 |
| TraesCS2A01G078000.1 | Wheat | vacuole | 43.55 | 23.62 |
| KRH63133 | Soybean | peroxisome, vacuole | 21.51 | 23.12 |
| TraesCS5A01G188200.1 | Wheat | vacuole | 44.09 | 22.59 |
| GSMUA_Achr5P05340_001 | Banana | vacuole | 43.01 | 22.28 |
| TraesCS1A01G203800.1 | Wheat | cytosol, plastid, vacuole | 29.03 | 22.13 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 30.65 | 20.58 |
| VIT_10s0042g00010.t01 | Wine grape | vacuole | 33.33 | 19.68 |
| Bra008125.1-P | Field mustard | cytosol, peroxisome, vacuole | 24.73 | 19.57 |
| PGSC0003DMT400056839 | Potato | vacuole | 32.8 | 19.55 |
| VIT_10s0042g00020.t01 | Wine grape | vacuole | 33.33 | 19.25 |
| TraesCS5A01G188300.1 | Wheat | extracellular, plasma membrane, vacuole | 38.71 | 19.1 |
| VIT_00s0575g00010.t01 | Wine grape | vacuole | 31.72 | 18.91 |
| VIT_13s0074g00080.t01 | Wine grape | vacuole | 32.26 | 18.63 |
| VIT_00s0575g00020.t01 | Wine grape | vacuole | 32.26 | 18.63 |
| VIT_10s0042g00050.t01 | Wine grape | vacuole | 32.26 | 18.63 |
| VIT_10s0071g00010.t01 | Wine grape | vacuole | 32.26 | 18.63 |
| Solyc12g039070.1.1 | Tomato | nucleus | 33.33 | 18.62 |
| VIT_13s0074g00070.t01 | Wine grape | vacuole | 26.88 | 18.25 |
| VIT_10s0042g00030.t01 | Wine grape | vacuole | 26.34 | 17.95 |
| VIT_10s0071g00020.t01 | Wine grape | vacuole | 29.57 | 17.8 |
| VIT_10s0071g00250.t01 | Wine grape | vacuole | 32.26 | 17.65 |
| KRH07462 | Soybean | vacuole | 32.8 | 17.58 |
| PGSC0003DMT400063277 | Potato | vacuole | 30.65 | 17.17 |
| Solyc03g114560.2.1 | Tomato | extracellular | 30.11 | 17.13 |
| Bra003820.1-P | Field mustard | vacuole | 29.57 | 17.03 |
| AT1G74010.1 | Thale cress | vacuole | 29.57 | 16.92 |
| VIT_17s0000g04600.t01 | Wine grape | vacuole | 31.18 | 16.91 |
| KRH45407 | Soybean | nucleus | 31.72 | 16.91 |
| TraesCS5A01G390200.1 | Wheat | golgi | 35.48 | 16.58 |
| TraesCS2A01G170300.1 | Wheat | cytosol | 28.49 | 16.56 |
| CDY66188 | Canola | vacuole | 29.03 | 16.46 |
| Solyc03g114530.2.1 | Tomato | vacuole | 29.03 | 16.27 |
| PGSC0003DMT400063286 | Potato | vacuole | 29.03 | 16.17 |
| CDX68204 | Canola | vacuole | 28.49 | 16.16 |
| Solyc03g114540.1.1 | Tomato | vacuole | 29.03 | 16.07 |
| PGSC0003DMT400063274 | Potato | vacuole | 29.03 | 16.07 |
| KRH54773 | Soybean | vacuole | 29.03 | 16.02 |
| CDX96505 | Canola | vacuole | 27.42 | 15.55 |
| VIT_17s0000g04610.t01 | Wine grape | vacuole | 30.65 | 15.53 |
| CDY45861 | Canola | vacuole | 27.42 | 15.45 |
| CDY47728 | Canola | vacuole | 26.88 | 15.29 |
| Bra008126.1-P | Field mustard | vacuole | 26.88 | 15.29 |
| Bra008127.1-P | Field mustard | vacuole | 26.88 | 15.24 |
| CDX73037 | Canola | vacuole | 26.88 | 15.24 |
| AT1G74020.1 | Thale cress | vacuole | 27.42 | 15.22 |
| CDX96506 | Canola | vacuole | 26.34 | 15.08 |
| CDX73038 | Canola | vacuole | 26.34 | 15.08 |
| CDX73039 | Canola | vacuole | 26.34 | 15.03 |
| AT1G74000.1 | Thale cress | vacuole | 26.34 | 14.89 |
| CDX96507 | Canola | vacuole | 25.81 | 14.72 |
| Bra015943.1-P | Field mustard | vacuole | 25.81 | 14.72 |
| TraesCS5A01G131200.1 | Wheat | vacuole | 19.89 | 14.62 |
| Solyc03g114550.1.1 | Tomato | vacuole | 21.51 | 14.6 |
| CDY66189 | Canola | vacuole | 23.12 | 14.48 |
| CDY47729 | Canola | vacuole | 25.27 | 14.46 |
| KRH56734 | Soybean | vacuole | 26.34 | 14.33 |
| CDY45863 | Canola | vacuole | 24.73 | 14.15 |
| Bra008124.1-P | Field mustard | vacuole | 24.73 | 14.15 |
| KRH03206 | Soybean | vacuole | 25.27 | 13.99 |
| TraesCS2A01G170200.1 | Wheat | plasma membrane, vacuole | 27.42 | 12.88 |
| TraesCS4A01G089000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 27.96 | 12.59 |
| VIT_17s0000g04590.t01 | Wine grape | endoplasmic reticulum, peroxisome, vacuole | 30.65 | 12.58 |
| VIT_17s0000g04580.t01 | Wine grape | extracellular, vacuole | 10.22 | 10.5 |
| Bra015944.1-P | Field mustard | vacuole | 25.27 | 7.87 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 5.91 | 7.1 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G437900.1 | EnsemblPlantsGene:TraesCS1A01G437900 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF28 | PFAM:PF03088 | SUPFAM:SSF63829 | MapMan:50.4.3 |
Description
No Description!
Coordinates
chr1A:+:587769449..587770204
Molecular Weight (calculated)
20616.9 Da
IEP (calculated)
10.026
GRAVY (calculated)
-0.499
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVVPGGGEA TVLVNQVDGF RLRFTNEVGV DQGTGQVYFT DSSMNFARSQ HGLVTKTGDS TGRLMMYDPQ TLDVTVLQAR MTSPNGVETR GVNVGTSEPF
101: ADLPGYPDNM RPDKGGYWVG LHCEKNELPF SRDSHLLVSR VGADEKIIKE MRGPKKVRLT KIMKRDNGKL YMGSVELRHV GVVKRK
101: ADLPGYPDNM RPDKGGYWVG LHCEKNELPF SRDSHLLVSR VGADEKIIKE MRGPKKVRLT KIMKRDNGKL YMGSVELRHV GVVKRK
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.