Factsheet for TraesCS2A01G078000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G093000.1	Wheat	golgi, vacuole	95.04	95.04
HORVU2Hr1G012970.2	Barley	mitochondrion	93.88	92.0
Zm00001d029115_P001	Maize	extracellular, vacuole	53.64	78.63
Zm00001d029108_P001	Maize	vacuole	70.55	76.34
Zm00001d029117_P001	Maize	vacuole	74.34	75.44
Zm00001d029111_P001	Maize	vacuole	74.34	75.44
KXG39404	Sorghum	golgi, vacuole	74.05	74.49
OQU75879	Sorghum	vacuole	65.6	73.53
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	75.22	72.47
TraesCS3A01G256600.1	Wheat	vacuole	70.55	72.02
Os08t0442200-01	Rice	extracellular	65.89	64.57
TraesCS7A01G138300.1	Wheat	cytosol	31.78	52.15
TraesCS7A01G138700.1	Wheat	cytosol	31.78	52.15
TraesCS3A01G496700.1	Wheat	golgi, vacuole	50.15	49.86
TraesCS3A01G298200.1	Wheat	cytosol	45.77	49.53
TraesCS3A01G496900.1	Wheat	vacuole	50.15	49.14
TraesCS1A01G026500.1	Wheat	vacuole	49.27	48.99
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.44	48.06
TraesCS7A01G138800.1	Wheat	golgi, vacuole	41.69	46.89
VIT_10s0042g00010.t01	Wine grape	vacuole	42.86	46.67
TraesCS5A01G188200.1	Wheat	vacuole	48.69	46.01
GSMUA_Achr5P05340_001	Banana	vacuole	47.81	45.68
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	49.85	45.36
VIT_13s0074g00070.t01	Wine grape	vacuole	36.15	45.26
VIT_00s0575g00010.t01	Wine grape	vacuole	41.11	45.19
VIT_10s0071g00020.t01	Wine grape	vacuole	40.52	44.98
VIT_10s0042g00020.t01	Wine grape	vacuole	41.98	44.72
VIT_10s0042g00050.t01	Wine grape	vacuole	41.69	44.41
VIT_00s0575g00020.t01	Wine grape	vacuole	41.4	44.1
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	44.31	43.93
VIT_10s0071g00010.t01	Wine grape	vacuole	41.11	43.79
TraesCS1A01G437900.1	Wheat	cytosol	23.62	43.55
VIT_13s0074g00080.t01	Wine grape	vacuole	40.82	43.48
VIT_10s0042g00030.t01	Wine grape	vacuole	33.53	42.12
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.16	41.99
PGSC0003DMT400063282	Potato	extracellular, vacuole	18.66	41.29
PGSC0003DMT400056839	Potato	vacuole	37.03	40.71
VIT_17s0000g04600.t01	Wine grape	vacuole	40.52	40.52
VIT_10s0071g00250.t01	Wine grape	vacuole	39.07	39.41
KRH07462	Soybean	vacuole	39.65	39.19
KRH45407	Soybean	nucleus	39.07	38.4
TraesCS5A01G131200.1	Wheat	vacuole	28.28	38.34
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	30.61	37.91
Solyc12g039070.1.1	Tomato	nucleus	36.44	37.54
Solyc03g114550.1.1	Tomato	vacuole	29.74	37.23
PGSC0003DMT400063277	Potato	vacuole	35.86	37.05
Solyc03g114560.2.1	Tomato	extracellular	35.28	37.0
PGSC0003DMT400063274	Potato	vacuole	36.15	36.9
TraesCS5A01G390200.1	Wheat	golgi	42.57	36.68
Solyc03g114530.2.1	Tomato	vacuole	35.28	36.45
CDX73037	Canola	vacuole	34.69	36.28
PGSC0003DMT400063286	Potato	vacuole	35.28	36.23
Solyc03g114540.1.1	Tomato	vacuole	35.28	36.01
Bra003820.1-P	Field mustard	vacuole	33.82	35.91
AT1G74010.1	Thale cress	vacuole	33.82	35.69
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.2	35.32
CDX96505	Canola	vacuole	33.53	35.06
AT1G74000.1	Thale cress	vacuole	33.24	34.65
KRH54773	Soybean	vacuole	33.82	34.42
Bra008126.1-P	Field mustard	vacuole	32.36	33.95
CDY47728	Canola	vacuole	32.36	33.95
KRH03206	Soybean	vacuole	33.24	33.93
Bra008127.1-P	Field mustard	vacuole	32.36	33.84
CDY66188	Canola	vacuole	32.36	33.84
CDX68204	Canola	vacuole	32.36	33.84
CDY66189	Canola	vacuole	29.15	33.67
CDY45861	Canola	vacuole	32.36	33.64
Bra015943.1-P	Field mustard	vacuole	31.78	33.44
CDX96507	Canola	vacuole	31.78	33.44
AT1G74020.1	Thale cress	vacuole	32.65	33.43
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	40.23	33.41
KRH56734	Soybean	vacuole	33.24	33.33
VIT_17s0000g04610.t01	Wine grape	vacuole	35.57	33.24
CDX96506	Canola	vacuole	31.49	33.23
KRH63133	Soybean	peroxisome, vacuole	16.62	32.95
CDY47729	Canola	vacuole	31.2	32.92
CDX73039	Canola	vacuole	31.2	32.82
CDX73038	Canola	vacuole	30.9	32.62
Bra008124.1-P	Field mustard	vacuole	30.9	32.62
CDY45863	Canola	vacuole	30.61	32.31
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	38.48	29.14
TraesCS1A01G203800.1	Wheat	cytosol, plastid, vacuole	19.83	27.87
TraesCS2A01G170300.1	Wheat	cytosol	25.66	27.5
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	26.53	22.98
Bra015944.1-P	Field mustard	vacuole	31.2	17.92

Protein Annotations

EnsemblPlants:TraesCS2A01G078000.1	EnsemblPlantsGene:TraesCS2A01G078000	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr2A:-:35583184..35584308

Molecular Weight (calculated)

36650.6 Da

IEP (calculated)

6.718

GRAVY (calculated)

-0.102

Length

343 amino acids

Sequence
(BLAST)

001: MGRRGSASGW LVLLVAIIAV SLVPSCSAAE VKTSPTEWSL HLNLPTGVTG AESLAFDARG QGPYTGVSDG RVLKWGGSSV GWTTFAHHAN YRKFPMCTVP
101: VAPSEETESL CGRPLGLAFH RKSGDLYIAD AYKGLMRVGP DGGEAEVLAT GAGGVPFNFV NGIDIDQVTG DVYFTDSSVT YPRRFNTEIM MNADATGRLL
201: KYDAVTKQVT VLKDGLPYPN GVAVSYDRTY VVVAHTVPCQ AHRYYLQGPK AGHYELLADL PGYPDNVRRD GKGGYWVALN QEKGRPGATT APVKHLVGVR
301: LDGGGVEVEE LTAAKGVTLS EVTERKGQLW LGSVELDYIG LVA

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.