Factsheet for TraesCS3A01G256600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G289800.1	Wheat	vacuole	96.43	96.43
HORVU3Hr1G065520.3	Barley	extracellular	87.8	91.61
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	96.13	90.48
Zm00001d029115_P001	Maize	extracellular, vacuole	56.85	81.62
Zm00001d029117_P001	Maize	vacuole	76.49	76.04
Zm00001d029111_P001	Maize	vacuole	76.49	76.04
Zm00001d029108_P001	Maize	vacuole	71.73	76.03
Os01t0698200-00	Rice	mitochondrion	64.58	74.83
KXG39404	Sorghum	golgi, vacuole	75.6	74.49
OQU75879	Sorghum	vacuole	66.37	72.88
TraesCS2A01G078000.1	Wheat	vacuole	72.02	70.55
TraesCS7A01G138300.1	Wheat	cytosol	33.33	53.59
TraesCS7A01G138700.1	Wheat	cytosol	33.04	53.11
TraesCS3A01G298200.1	Wheat	cytosol	48.21	51.1
TraesCS3A01G496700.1	Wheat	golgi, vacuole	52.38	51.01
TraesCS1A01G026500.1	Wheat	vacuole	51.79	50.43
TraesCS3A01G496900.1	Wheat	vacuole	52.38	50.29
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	44.94	48.71
VIT_10s0042g00010.t01	Wine grape	vacuole	43.15	46.03
TraesCS1A01G437900.1	Wheat	cytosol	25.3	45.7
VIT_00s0575g00010.t01	Wine grape	vacuole	42.26	45.51
TraesCS5A01G188200.1	Wheat	vacuole	49.11	45.45
VIT_13s0074g00070.t01	Wine grape	vacuole	36.9	45.26
GSMUA_Achr5P05340_001	Banana	vacuole	48.21	45.13
VIT_10s0042g00020.t01	Wine grape	vacuole	43.15	45.03
VIT_10s0071g00020.t01	Wine grape	vacuole	41.37	44.98
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	50.3	44.83
VIT_10s0042g00050.t01	Wine grape	vacuole	42.56	44.41
VIT_00s0575g00020.t01	Wine grape	vacuole	42.56	44.41
TraesCS7A01G138800.1	Wheat	golgi, vacuole	39.88	43.93
VIT_13s0074g00080.t01	Wine grape	vacuole	41.96	43.79
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	44.94	43.64
VIT_10s0071g00010.t01	Wine grape	vacuole	41.67	43.48
VIT_10s0042g00030.t01	Wine grape	vacuole	34.52	42.49
VIT_17s0000g04600.t01	Wine grape	vacuole	40.48	39.65
VIT_10s0071g00250.t01	Wine grape	vacuole	39.88	39.41
KRH07462	Soybean	vacuole	40.18	38.9
TraesCS5A01G131200.1	Wheat	vacuole	29.17	38.74
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	27.08	38.72
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.83	38.67
KRH45407	Soybean	nucleus	39.58	38.11
AT1G74010.1	Thale cress	vacuole	36.01	37.23
Bra003820.1-P	Field mustard	vacuole	35.71	37.15
Solyc03g114550.1.1	Tomato	vacuole	30.06	36.86
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.96	36.77
CDX73037	Canola	vacuole	35.71	36.59
PGSC0003DMT400056839	Potato	vacuole	33.93	36.54
Solyc03g114560.2.1	Tomato	extracellular	35.42	36.39
PGSC0003DMT400063274	Potato	vacuole	36.01	36.01
PGSC0003DMT400063286	Potato	vacuole	35.71	35.93
Solyc03g114540.1.1	Tomato	vacuole	35.71	35.71
CDY66189	Canola	vacuole	31.55	35.69
Bra008127.1-P	Field mustard	vacuole	34.82	35.67
CDY47729	Canola	vacuole	34.23	35.38
CDX96505	Canola	vacuole	34.52	35.37
TraesCS5A01G390200.1	Wheat	golgi	41.67	35.18
CDY45861	Canola	vacuole	34.52	35.15
CDX96506	Canola	vacuole	33.93	35.08
Bra008124.1-P	Field mustard	vacuole	33.93	35.08
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.87	35.02
KRH54773	Soybean	vacuole	35.12	35.01
PGSC0003DMT400063277	Potato	vacuole	34.52	34.94
Bra008126.1-P	Field mustard	vacuole	33.93	34.86
CDY47728	Canola	vacuole	33.93	34.86
KRH03206	Soybean	vacuole	34.82	34.82
CDX73038	Canola	vacuole	33.63	34.77
CDY45863	Canola	vacuole	33.63	34.77
CDX68204	Canola	vacuole	33.93	34.76
CDY66188	Canola	vacuole	33.93	34.76
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	42.26	34.38
Solyc03g114530.2.1	Tomato	vacuole	33.93	34.34
KRH56734	Soybean	vacuole	34.82	34.21
AT1G74020.1	Thale cress	vacuole	33.93	34.03
Solyc12g039070.1.1	Tomato	nucleus	33.33	33.63
CDX96507	Canola	vacuole	32.44	33.44
Bra015943.1-P	Field mustard	vacuole	32.44	33.44
AT1G74000.1	Thale cress	vacuole	32.74	33.43
CDX73039	Canola	vacuole	32.14	33.13
KRH63133	Soybean	peroxisome, vacuole	16.37	31.79
VIT_17s0000g04610.t01	Wine grape	vacuole	33.93	31.06
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	40.77	30.24
TraesCS2A01G170300.1	Wheat	cytosol	27.68	29.06
TraesCS1A01G203800.1	Wheat	cytosol, plastid, vacuole	19.94	27.46
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	27.08	22.98
Bra015944.1-P	Field mustard	vacuole	33.04	18.59

Protein Annotations

EnsemblPlants:TraesCS3A01G256600.1	EnsemblPlantsGene:TraesCS3A01G256600	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	MapMan:50.4.3	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:478665579..478666768

Molecular Weight (calculated)

36336.2 Da

IEP (calculated)

6.525

GRAVY (calculated)

-0.119

Length

336 amino acids

Sequence
(BLAST)

001: MGRNLAAVLV VLACLVSLAS AQQVKTTDTR WSYRLPLPDG VSGAESLAFA GKDGVYTGVS DGRVLRWGGS AAGWTTFAYN ANYRKIPLCS DSGVPSEQKE
101: SICGRPLGVR FNRKTGELYI ADAYLGLMKV GPEGGEAQVL ATEANGIPFH FLNGLDVDQA TGDVYFTDSS ANYPRRFNTE IIMNADATGR LLKYDARTEL
201: VTVLKAELPY PNGVALSRDR THLVVAHTVP CQAFRYWLKG PKAGQYELFA DLPGYPDNVR RDGQGGFWVA LNQEKARLNA TAAPVKHLVG VRLGADGVEV
301: EELTAARGVT LSEVAEQNGN KLWLGSVELD YIGLFV

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.