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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 8
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 72.31 100.0
CDY45863 Canola vacuole 99.08 99.08
AT1G74000.1 Thale cress vacuole 81.54 80.55
Bra008127.1-P Field mustard vacuole 76.62 75.91
Bra015943.1-P Field mustard vacuole 73.54 73.31
Bra008126.1-P Field mustard vacuole 72.92 72.48
Bra003820.1-P Field mustard vacuole 58.77 59.13
Bra015944.1-P Field mustard vacuole 79.08 43.05
VIT_17s0000g04600.t01 Wine grape vacuole 44.62 42.27
PGSC0003DMT400056839 Potato vacuole 38.77 40.38
KRH63133 Soybean peroxisome, vacuole 20.92 39.31
KRH54773 Soybean vacuole 40.31 38.87
PGSC0003DMT400063277 Potato vacuole 39.38 38.55
Solyc03g114560.2.1 Tomato extracellular 38.46 38.23
Solyc03g114550.1.1 Tomato vacuole 32.0 37.96
Solyc03g114530.2.1 Tomato vacuole 38.77 37.95
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 32.31 37.91
PGSC0003DMT400063282 Potato extracellular, vacuole 17.85 37.42
PGSC0003DMT400063286 Potato vacuole 38.15 37.13
TraesCS5B01G195300.1 Wheat endoplasmic reticulum, extracellular, vacuole 39.38 36.99
Solyc12g039070.1.1 Tomato nucleus 37.85 36.94
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 35.08 36.77
HORVU5Hr1G058910.2 Barley endoplasmic reticulum, extracellular, vacuole 39.08 36.71
Solyc03g114540.1.1 Tomato vacuole 37.85 36.61
TraesCS5D01G202700.1 Wheat vacuole 38.77 36.42
KRH03206 Soybean vacuole 37.54 36.31
KRH56734 Soybean vacuole 38.15 36.26
Zm00001d029115_P001 Maize extracellular, vacuole 25.85 35.9
Zm00001d020306_P001 Maize endoplasmic reticulum, vacuole 37.54 35.57
EER96671 Sorghum endoplasmic reticulum, golgi 37.54 34.86
PGSC0003DMT400063274 Potato vacuole 36.0 34.82
TraesCS3B01G289800.1 Wheat vacuole 35.38 34.23
TraesCS5B01G382800.1 Wheat vacuole 35.69 34.02
TraesCS3A01G256600.1 Wheat vacuole 35.08 33.93
TraesCS5B01G383000.1 Wheat vacuole 35.38 33.92
Os01t0698200-00 Rice mitochondrion 29.85 33.45
TraesCS3D01G303900.1 Wheat cytosol 32.92 33.44
HORVU3Hr1G065520.3 Barley extracellular 32.92 33.23
GSMUA_Achr5P05340_001 Banana vacuole 36.31 32.87
TraesCS3A01G298200.1 Wheat cytosol 32.0 32.81
HORVU5Hr1G093840.1 Barley vacuole 34.15 32.74
TraesCS5A01G188300.1 Wheat extracellular, plasma membrane, vacuole 37.85 32.63
TraesCS5D01G389100.1 Wheat plastid, vacuole 35.38 32.39
OQU75879 Sorghum vacuole 30.46 32.35
HORVU2Hr1G013460.2 Barley golgi, mitochondrion, vacuole 28.92 32.3
TraesCS3D01G256900.1 Wheat mitochondrion, plastid 35.38 32.21
Zm00001d012249_P001 Maize vacuole 34.15 32.17
Zm00001d012252_P001 Maize vacuole 34.15 32.17
EER90208 Sorghum vacuole 34.15 32.08
EES05895 Sorghum golgi, vacuole 34.15 32.08
EES07680 Sorghum golgi, vacuole 34.15 32.08
Zm00001d029117_P001 Maize vacuole 33.23 31.95
HORVU2Hr1G064060.1 Barley mitochondrion, vacuole 24.92 31.89
HORVU6Hr1G026020.1 Barley cytosol 24.31 31.85
HORVU3Hr1G109810.1 Barley golgi, vacuole 34.15 31.81
Os07t0543600-00 Rice golgi, vacuole 34.15 31.71
EES05427 Sorghum vacuole 33.54 31.69
Zm00001d020308_P001 Maize cytosol, plastid, vacuole 15.69 31.68
Zm00001d029111_P001 Maize vacuole 32.92 31.66
EES01763 Sorghum vacuole 33.54 31.59
TraesCS3A01G496700.1 Wheat golgi, vacuole 33.54 31.59
Bra007294.1-P Field mustard vacuole 36.31 31.55
TraesCS3D01G503900.1 Wheat nucleus 30.15 31.51
OQU85880 Sorghum golgi, vacuole 33.54 31.5
TraesCS2D01G076200.1 Wheat vacuole 33.23 31.49
EES01841 Sorghum vacuole 33.54 31.41
KXG39404 Sorghum golgi, vacuole 32.92 31.38
Zm00001d012375_P001 Maize vacuole 32.31 31.34
TraesCS3D01G504000.1 Wheat vacuole 33.23 31.3
TraesCS7D01G075900.1 Wheat vacuole 33.23 31.3
Zm00001d012366_P001 Maize vacuole 33.23 31.3
Zm00001d012368_P001 Maize golgi, vacuole 33.23 31.3
Zm00001d012371_P001 Maize golgi, vacuole 33.23 31.3
Zm00001d012377_P001 Maize vacuole 33.23 31.3
TraesCS2B01G092900.1 Wheat golgi, vacuole 32.92 31.29
TraesCS2B01G093000.1 Wheat golgi, vacuole 32.92 31.2
Os08t0175000-00 Rice golgi, mitochondrion, vacuole 34.15 31.18
OQU87434 Sorghum golgi, vacuole 33.85 31.07
TraesCS2A01G078000.1 Wheat vacuole 32.62 30.9
TraesCS3B01G338500.1 Wheat extracellular, golgi, vacuole 32.62 30.9
TraesCS3A01G496900.1 Wheat vacuole 33.23 30.86
Zm00001d012363_P001 Maize endoplasmic reticulum, extracellular 13.85 30.82
TraesCS2B01G281700.1 Wheat golgi, vacuole 32.62 30.81
Bra018623.1-P Field mustard cytosol 33.23 30.77
Bra000222.1-P Field mustard cytosol 32.62 30.72
TraesCS1A01G026500.1 Wheat vacuole 32.62 30.72
TraesCS3B01G559100.1 Wheat vacuole 32.62 30.72
TraesCS2D01G076400.1 Wheat vacuole 32.31 30.61
TraesCSU01G189700.1 Wheat vacuole 32.31 30.61
TraesCS7D01G076000.1 Wheat vacuole 32.0 30.5
TraesCS3B01G559000.1 Wheat cytosol 17.54 30.48
TraesCSU01G223800.1 Wheat vacuole 32.31 30.43
OQU79673 Sorghum vacuole 32.0 30.41
TraesCS2D01G076000.1 Wheat golgi, vacuole 32.0 30.32
Zm00001d029108_P001 Maize vacuole 29.54 30.28
TraesCS3B01G558800.1 Wheat cytosol 19.38 30.14
TraesCS7A01G138300.1 Wheat cytosol 19.38 30.14
TraesCS7A01G138700.1 Wheat cytosol 19.38 30.14
TraesCS7D01G076600.1 Wheat cytosol 19.38 30.14
HORVU2Hr1G012970.2 Barley mitochondrion 32.31 30.0
Os08t0442200-01 Rice extracellular 32.31 30.0
TraesCS5B01G195400.1 Wheat vacuole 33.23 29.67
TraesCS7B01G040900.1 Wheat golgi, vacuole 31.69 29.6
TraesCS7D01G140500.1 Wheat golgi, vacuole 31.38 29.57
TraesCS2D01G076300.1 Wheat vacuole 31.38 29.48
TraesCS7D01G076500.1 Wheat cytosol 17.23 29.47
EES17427 Sorghum golgi, vacuole 31.08 29.45
Os06t0623700-01 Rice golgi, vacuole 31.69 29.43
TraesCS7D01G139900.1 Wheat vacuole 31.38 29.31
OQU76676 Sorghum extracellular, golgi, vacuole 31.08 29.19
TraesCS7D01G140000.1 Wheat golgi, vacuole 31.08 29.02
EES17425 Sorghum extracellular 23.38 29.01
EER96672 Sorghum vacuole 32.62 28.96
HORVU5Hr1G091230.1 Barley golgi, mitochondrion, plastid, vacuole 31.69 28.93
TraesCS5A01G188200.1 Wheat vacuole 32.31 28.93
TraesCS7D01G076300.1 Wheat vacuole 32.0 28.81
TraesCS7B01G040400.1 Wheat golgi, vacuole 30.77 28.74
HORVU7Hr1G028580.1 Barley golgi, vacuole 31.08 28.69
TraesCS5D01G202800.1 Wheat golgi, vacuole 32.0 28.57
Bra004613.1-P Field mustard vacuole 32.92 28.53
TraesCS7A01G138800.1 Wheat golgi, vacuole 26.77 28.52
TraesCSU01G104000.1 Wheat golgi, vacuole 30.46 28.45
HORVU5Hr1G058940.2 Barley vacuole 32.0 28.34
HORVU5Hr1G078340.1 Barley golgi, vacuole 21.23 28.28
Os09t0374900-00 Rice cytosol, golgi, plastid, vacuole 33.23 28.27
Zm00001d020307_P001 Maize endoplasmic reticulum, vacuole 17.85 28.16
TraesCSU01G240600.1 Wheat cytosol 16.31 28.04
TraesCSU01G255900.1 Wheat cytosol 16.31 28.04
TraesCS2A01G260200.1 Wheat mitochondrion, vacuole 29.54 27.75
TraesCS7D01G140600.1 Wheat endoplasmic reticulum, plasma membrane 26.15 27.69
TraesCS5B01G330900.1 Wheat extracellular, vacuole 15.69 27.57
HORVU3Hr1G074780.3 Barley cytosol, vacuole 31.69 27.54
Bra004614.1-P Field mustard vacuole 30.77 27.1
Bra014655.1-P Field mustard endoplasmic reticulum, golgi 31.69 27.03
HORVU7Hr1G028550.2 Barley plastid 14.77 26.97
Bra000223.1-P Field mustard vacuole 30.15 26.56
Bra002383.1-P Field mustard vacuole 31.69 26.08
Bra034344.1-P Field mustard vacuole 29.23 25.68
Bra003263.1-P Field mustard vacuole 28.92 25.41
Bra007293.1-P Field mustard vacuole 28.62 25.2
Bra014652.1-P Field mustard extracellular, golgi, vacuole 28.62 25.14
TraesCS1A01G437900.1 Wheat cytosol 14.15 24.73
HORVU5Hr1G009400.2 Barley cytosol, mitochondrion, plastid, vacuole 10.15 24.26
Bra014536.1-P Field mustard vacuole 29.23 22.95
Bra007457.1-P Field mustard golgi, vacuole 28.92 22.76
Bra038899.1-P Field mustard golgi, vacuole 23.69 20.75
Bra038898.1-P Field mustard golgi, vacuole 22.77 18.64
Bra036798.1-P Field mustard vacuole 23.69 18.6
Zm00001d012373_P001 Maize vacuole 33.23 18.37
HORVU4Hr1G016850.1 Barley cytosol 9.54 17.82
Protein Annotations
EnsemblPlants:Bra008124.1EnsemblPlants:Bra008124.1-PEnsemblPlantsGene:Bra008124Gene3D:2.120.10.30GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016844InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042
InterPro:Strictosidine_synth_cons-regInterPro:Strictosidine_synthasePANTHER:PTHR10426PANTHER:PTHR10426:SF59PFAM:PF03088SEG:seg
SignalP:SignalP-noTMSUPFAM:SSF63829UniParc:UPI000254578AUniProt:M4CV78MapMan:50.4.3:
Description
AT1G74000 (E=3e-144) SS3 | SS3 (STRICTOSIDINE SYNTHASE 3); strictosidine synthase
Coordinates
chrA02:-:13259220..13261804
Molecular Weight (calculated)
34150.5 Da
IEP (calculated)
9.345
GRAVY (calculated)
0.060
Length
325 amino acids
Sequence
(BLAST)
001: MTSFVSVISL LLSFSLAIFS DAASFQKFPV PGKRSGPEAF AFDSTGKGFY TGVSGGKIFK YLPGKGYVDF GYITVSSKSQ WCDGALGIAY MSKCGRPAGI
101: AFNNKTGELY VADAPLGLHV IPSGGGYAKK IADSADGKPF LFLDGLDVDP TTGVVYFTSF SSKFSPGDVL KAVASKDASG KLFKYDPSKR VVTVLLEGLS
201: GSAGCAVSSD GSFVLVSQFT KSNIKRYWIK GSKAGTSEDF TNAVSNPDNI KRIGSSGNFW VASVVNTATG PTNPSAVKIN SDGRVLQTIS VKDKFGDTLV
301: SEVNEFEGRL YVGTLSGPFA GIIDL
Best Arabidopsis Sequence Match ( AT1G74000.1 )
(BLAST)
001: MMRSFVSLIS LLLLLSFSSS VLSTKKSSFQ KLPVPGNRTG PEAFAFDSTG KGFYTGVTGG KILKYLPKKG YVDFAQITNS SKSSLCDGAL GTTNVEKCGR
101: PAGIAFNTKT GDLYVADAAL GLHVIPRRGG LAKKIADSVG GKPFLFLDGL DVDPTTGVVY FTSFSSTFGP RDVLKAVATK DSTGKFFKYD PSKKVVTVLM
201: EGLSGSAGCA VSSDGSFVLV GQFTKSNIKR YWIKGSKAGT SEDFTNSVSN PDNIKRIGST GNFWVASVVN SATGPTNPSA VKVSSAGKVL QTIPLKDKFG
301: DTLVSEVNEY KGQLYIGALF GPFAGILKL
Arabidopsis Description
SSL11Protein STRICTOSIDINE SYNTHASE-LIKE 11 [Source:UniProtKB/Swiss-Prot;Acc:P92976]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.