Factsheet for TraesCSU01G223800.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G026500.1	Wheat	vacuole	98.84	98.84
TraesCSU01G255900.1	Wheat	cytosol	53.62	97.88
TraesCSU01G240600.1	Wheat	cytosol	53.33	97.35
TraesCS7D01G076000.1	Wheat	vacuole	95.36	96.48
TraesCSU01G104000.1	Wheat	golgi, vacuole	68.7	68.1
OQU85880	Sorghum	golgi, vacuole	66.09	65.9
EES07680	Sorghum	golgi, vacuole	66.09	65.9
EES05895	Sorghum	golgi, vacuole	66.09	65.9
EER90208	Sorghum	vacuole	65.51	65.32
EES05427	Sorghum	vacuole	64.64	64.83
Os07t0543600-00	Rice	golgi, vacuole	63.77	62.86
TraesCSU01G189700.1	Wheat	vacuole	48.99	49.27
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	42.32	47.1
GSMUA_Achr5P05340_001	Banana	vacuole	46.38	44.57
VIT_13s0074g00070.t01	Wine grape	vacuole	32.46	40.88
VIT_00s0575g00010.t01	Wine grape	vacuole	36.23	40.06
VIT_13s0074g00080.t01	Wine grape	vacuole	37.39	40.06
VIT_10s0042g00010.t01	Wine grape	vacuole	36.52	40.0
VIT_10s0042g00030.t01	Wine grape	vacuole	31.59	39.93
VIT_00s0575g00020.t01	Wine grape	vacuole	37.1	39.75
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.58	39.23
VIT_10s0071g00020.t01	Wine grape	vacuole	35.07	39.16
VIT_10s0042g00020.t01	Wine grape	vacuole	36.52	39.13
VIT_10s0042g00050.t01	Wine grape	vacuole	36.52	39.13
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.39	38.71
VIT_10s0071g00010.t01	Wine grape	vacuole	35.94	38.51
KRH07462	Soybean	vacuole	37.39	37.18
PGSC0003DMT400056839	Potato	vacuole	33.33	36.86
KRH45407	Soybean	nucleus	35.94	35.53
VIT_10s0071g00250.t01	Wine grape	vacuole	34.49	35.0
KRH56734	Soybean	vacuole	34.49	34.8
AT1G74010.1	Thale cress	vacuole	32.75	34.77
CDX96505	Canola	vacuole	33.04	34.76
Bra003820.1-P	Field mustard	vacuole	32.46	34.67
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	27.83	34.66
Solyc12g039070.1.1	Tomato	nucleus	33.33	34.53
CDX73037	Canola	vacuole	32.75	34.45
VIT_17s0000g04600.t01	Wine grape	vacuole	34.2	34.4
CDY66189	Canola	vacuole	29.57	34.34
Solyc03g114560.2.1	Tomato	extracellular	32.46	34.25
KRH03206	Soybean	vacuole	33.33	34.23
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	23.19	34.04
CDY47728	Canola	vacuole	32.17	33.95
Bra008126.1-P	Field mustard	vacuole	32.17	33.95
CDY45861	Canola	vacuole	32.46	33.94
Bra008127.1-P	Field mustard	vacuole	32.17	33.84
PGSC0003DMT400063277	Potato	vacuole	32.17	33.43
AT1G74020.1	Thale cress	vacuole	32.17	33.13
PGSC0003DMT400063274	Potato	vacuole	32.17	33.04
KRH54773	Soybean	vacuole	32.17	32.94
CDX68204	Canola	vacuole	31.3	32.93
CDX96506	Canola	vacuole	31.01	32.92
AT1G74000.1	Thale cress	vacuole	31.3	32.83
Solyc03g114540.1.1	Tomato	vacuole	31.88	32.74
PGSC0003DMT400063286	Potato	vacuole	31.59	32.63
CDX73038	Canola	vacuole	30.72	32.62
CDY47729	Canola	vacuole	30.72	32.62
Solyc03g114530.2.1	Tomato	vacuole	31.3	32.53
CDX96507	Canola	vacuole	30.72	32.52
Bra015943.1-P	Field mustard	vacuole	30.72	32.52
Solyc03g114550.1.1	Tomato	vacuole	25.8	32.48
CDY66188	Canola	vacuole	30.72	32.32
Bra008124.1-P	Field mustard	vacuole	30.43	32.31
CDX73039	Canola	vacuole	30.43	32.21
CDY45863	Canola	vacuole	30.14	32.0
VIT_17s0000g04610.t01	Wine grape	vacuole	33.04	31.06
KRH63133	Soybean	peroxisome, vacuole	13.91	27.75
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	35.07	26.71
Bra015944.1-P	Field mustard	vacuole	30.14	17.42

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042	PFAM:PF03088	PANTHER:PTHR10426
PANTHER:PTHR10426:SF28	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
EnsemblPlantsGene:TraesCSU01G223800	EnsemblPlants:TraesCSU01G223800.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:+:330012447..330013484

Molecular Weight (calculated)

37711.1 Da

IEP (calculated)

8.289

GRAVY (calculated)

-0.369

Length

345 amino acids

Sequence
(BLAST)

001: MGCSMSRLLK ATVALVILVL LFMPGAMAAA AASFDASRAQ QLPLPPGEVH GPESVAFDAQ GRGPYSGVSD GRILRWNGPK LGWTTYAYGP GYDSETCTTS
101: RFGTEADIES RCGRPLGLRF NEKTGDLYVA DAYKGLMRVP PGGGEATVLV DQIDGMPLRF TNGVDVDQVT GQVYFTHSSM NYDRSEHEMV TKTGDSTGRL
201: MMYDPRTSDA TMLQPRMTYP NGVSLSADRT HLVVASTGPC KLLRHWIRGV DAGKSEPFAD LPGYPDNVRP DRKGGYWVAL HREKNELPFG RDSHLLAVRV
301: GADGKIVEQM RGSKKVRPTE IMERDDGKLY LGSVELPYVG VVKRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.