Factsheet for TraesCSU01G255900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G240600.1	Wheat	cytosol	97.88	97.88
TraesCS7D01G076500.1	Wheat	cytosol	94.18	93.68
TraesCSU01G223800.1	Wheat	vacuole	97.88	53.62
OQU85880	Sorghum	golgi, vacuole	74.07	40.46
EES07680	Sorghum	golgi, vacuole	74.07	40.46
EES05895	Sorghum	golgi, vacuole	73.55	40.17
EER90208	Sorghum	vacuole	73.55	40.17
TraesCSU01G104000.1	Wheat	golgi, vacuole	73.02	39.66
EES05427	Sorghum	vacuole	71.96	39.53
Os07t0543600-00	Rice	golgi, vacuole	70.37	38.0
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	48.15	29.35
KRH63133	Soybean	peroxisome, vacuole	24.34	26.59
TraesCSU01G189700.1	Wheat	vacuole	47.62	26.24
GSMUA_Achr5P05340_001	Banana	vacuole	48.68	25.63
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	33.33	22.74
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	28.04	22.55
VIT_13s0074g00080.t01	Wine grape	vacuole	38.1	22.36
VIT_10s0042g00010.t01	Wine grape	vacuole	37.04	22.22
VIT_10s0042g00020.t01	Wine grape	vacuole	36.51	21.43
VIT_10s0042g00050.t01	Wine grape	vacuole	36.51	21.43
VIT_10s0071g00010.t01	Wine grape	vacuole	36.51	21.43
VIT_00s0575g00020.t01	Wine grape	vacuole	36.51	21.43
VIT_00s0575g00010.t01	Wine grape	vacuole	34.92	21.15
PGSC0003DMT400056839	Potato	vacuole	33.86	20.51
VIT_10s0071g00020.t01	Wine grape	vacuole	33.33	20.39
VIT_13s0074g00070.t01	Wine grape	vacuole	28.57	19.71
Solyc12g039070.1.1	Tomato	nucleus	33.86	19.22
KRH07462	Soybean	vacuole	34.92	19.02
VIT_17s0000g04600.t01	Wine grape	vacuole	33.33	18.37
VIT_10s0042g00030.t01	Wine grape	vacuole	26.45	18.32
VIT_10s0071g00250.t01	Wine grape	vacuole	32.8	18.24
PGSC0003DMT400063277	Potato	vacuole	31.75	18.07
KRH45407	Soybean	nucleus	33.33	18.05
Bra003820.1-P	Field mustard	vacuole	30.69	17.96
CDY45861	Canola	vacuole	31.22	17.88
AT1G74010.1	Thale cress	vacuole	30.69	17.85
Bra008126.1-P	Field mustard	vacuole	30.69	17.74
Solyc03g114560.2.1	Tomato	extracellular	30.69	17.74
CDY47728	Canola	vacuole	30.69	17.74
CDX96505	Canola	vacuole	30.69	17.68
Bra008127.1-P	Field mustard	vacuole	30.69	17.68
AT1G74000.1	Thale cress	vacuole	30.69	17.63
KRH56734	Soybean	vacuole	31.75	17.54
CDX73038	Canola	vacuole	30.16	17.54
CDX96506	Canola	vacuole	30.16	17.54
Solyc03g114530.2.1	Tomato	vacuole	30.69	17.47
CDX73037	Canola	vacuole	30.16	17.38
CDX73039	Canola	vacuole	29.63	17.18
CDX96507	Canola	vacuole	29.63	17.18
Bra015943.1-P	Field mustard	vacuole	29.63	17.18
CDX68204	Canola	vacuole	29.63	17.07
CDY66188	Canola	vacuole	29.63	17.07
KRH03206	Soybean	vacuole	30.16	16.96
PGSC0003DMT400063286	Potato	vacuole	29.63	16.77
AT1G74020.1	Thale cress	vacuole	29.63	16.72
Solyc03g114540.1.1	Tomato	vacuole	29.63	16.67
PGSC0003DMT400063274	Potato	vacuole	29.63	16.67
KRH54773	Soybean	vacuole	29.63	16.62
CDY47729	Canola	vacuole	28.57	16.62
Bra008124.1-P	Field mustard	vacuole	28.04	16.31
CDY45863	Canola	vacuole	27.51	16.0
CDY66189	Canola	vacuole	24.87	15.82
Solyc03g114550.1.1	Tomato	vacuole	22.75	15.69
VIT_17s0000g04610.t01	Wine grape	vacuole	28.57	14.71
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	30.69	12.8
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	8.99	9.39
Bra015944.1-P	Field mustard	vacuole	28.57	9.05
PGSC0003DMT400063282	Potato	extracellular, vacuole	2.12	2.58

Protein Annotations

EnsemblPlants:TraesCSU01G255900.1	EnsemblPlantsGene:TraesCSU01G255900	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SUPFAM:SSF63829	MapMan:50.4.3

Description

No Description!

Coordinates

chrUn:+:396475176..396475747

Molecular Weight (calculated)

21117.3 Da

IEP (calculated)

9.524

GRAVY (calculated)

-0.539

Length

189 amino acids

Sequence
(BLAST)

001: MPLRFTNGVD VDQVTGQVYF THSSMNYDRS EHEMVTKTGD STGRLMMYDP RTSDATVLQP RMTYPNGVSL SADRTHLVVA STGPCKLLRH WIRGVDAGKS
101: EPFADLPGYP DNVRPTGGGY WVALHREKNE LPFGRDSHLL AVRVGAHGKI VEQMRGSKKV RPTEIMERDD GKLYLGSVEL PYVGVVKRK

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.