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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 7
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g114540.1.1 Tomato vacuole 95.51 94.94
PGSC0003DMT400063274 Potato vacuole 88.02 87.5
PGSC0003DMT400063282 Potato extracellular, vacuole 39.22 84.52
PGSC0003DMT400063277 Potato vacuole 67.66 68.07
PGSC0003DMT400056839 Potato vacuole 52.99 56.73
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 44.91 54.15
VIT_17s0000g04600.t01 Wine grape vacuole 48.5 47.23
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 29.04 41.28
CDX73037 Canola vacuole 39.52 40.24
KRH54773 Soybean vacuole 40.42 40.06
CDX96505 Canola vacuole 39.22 39.94
Bra008126.1-P Field mustard vacuole 38.62 39.45
Bra008127.1-P Field mustard vacuole 38.62 39.33
KRH03206 Soybean vacuole 39.52 39.29
KRH56734 Soybean vacuole 40.12 39.18
CDY47728 Canola vacuole 38.32 39.14
AT1G74020.1 Thale cress vacuole 38.92 38.81
AT1G74010.1 Thale cress vacuole 37.72 38.77
CDY47729 Canola vacuole 37.43 38.46
Bra008124.1-P Field mustard vacuole 37.13 38.15
CDX96506 Canola vacuole 37.13 38.15
Bra015943.1-P Field mustard vacuole 37.13 38.04
CDX96507 Canola vacuole 37.13 38.04
CDY45863 Canola vacuole 36.83 37.85
KRH63133 Soybean peroxisome, vacuole 19.46 37.57
CDX73038 Canola vacuole 36.53 37.54
CDX73039 Canola vacuole 36.53 37.42
AT1G74000.1 Thale cress vacuole 36.83 37.39
Zm00001d029115_P001 Maize extracellular, vacuole 26.05 37.18
PGSC0003DMT400076777 Potato vacuole 41.32 37.1
CDY45861 Canola vacuole 36.53 36.97
PGSC0003DMT400044684 Potato vacuole 38.62 36.86
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 34.13 36.77
Bra003820.1-P Field mustard vacuole 35.03 36.22
HORVU2Hr1G013460.2 Barley golgi, mitochondrion, vacuole 31.44 36.08
CDY66188 Canola vacuole 35.33 35.98
HORVU3Hr1G065520.3 Barley extracellular 34.43 35.71
TraesCS3A01G256600.1 Wheat vacuole 35.93 35.71
TraesCS3B01G289800.1 Wheat vacuole 35.93 35.71
Zm00001d012363_P001 Maize endoplasmic reticulum, extracellular 15.57 35.62
TraesCS5B01G382800.1 Wheat vacuole 36.23 35.48
CDY66189 Canola vacuole 31.44 35.35
TraesCS2A01G078000.1 Wheat vacuole 36.23 35.28
PGSC0003DMT400044531 Potato vacuole 39.22 35.12
HORVU5Hr1G093840.1 Barley vacuole 35.63 35.1
TraesCS5B01G383000.1 Wheat vacuole 35.63 35.1
CDX68204 Canola vacuole 34.43 35.06
PGSC0003DMT400007661 Potato vacuole 39.52 34.83
TraesCS3A01G298200.1 Wheat cytosol 32.93 34.7
HORVU6Hr1G026020.1 Barley cytosol 25.75 34.68
TraesCS2B01G093000.1 Wheat golgi, vacuole 35.33 34.4
TraesCS2D01G076000.1 Wheat golgi, vacuole 35.33 34.4
Zm00001d029117_P001 Maize vacuole 34.73 34.32
TraesCS3B01G559000.1 Wheat cytosol 19.16 34.22
TraesCS2B01G092900.1 Wheat golgi, vacuole 35.03 34.21
TraesCS2D01G076200.1 Wheat vacuole 35.03 34.11
Zm00001d029111_P001 Maize vacuole 34.43 34.02
OQU75879 Sorghum vacuole 31.14 33.99
Zm00001d012366_P001 Maize vacuole 35.03 33.91
Zm00001d012368_P001 Maize golgi, vacuole 35.03 33.91
Zm00001d020306_P001 Maize endoplasmic reticulum, vacuole 34.73 33.82
Os01t0698200-00 Rice mitochondrion 29.34 33.79
Zm00001d029108_P001 Maize vacuole 32.04 33.75
TraesCS3D01G303900.1 Wheat cytosol 32.34 33.75
HORVU2Hr1G012970.2 Barley mitochondrion 35.33 33.71
HORVU7Hr1G028550.2 Barley plastid 17.96 33.71
Zm00001d012371_P001 Maize golgi, vacuole 34.73 33.62
Zm00001d012377_P001 Maize vacuole 34.73 33.62
TraesCS5D01G202700.1 Wheat vacuole 34.73 33.53
KXG39404 Sorghum golgi, vacuole 34.13 33.43
TraesCS5D01G389100.1 Wheat plastid, vacuole 35.33 33.24
TraesCS2D01G076300.1 Wheat vacuole 34.43 33.24
TraesCS5B01G195300.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.43 33.24
TraesCS2D01G076400.1 Wheat vacuole 34.13 33.24
TraesCSU01G189700.1 Wheat vacuole 34.13 33.24
TraesCS3D01G503900.1 Wheat nucleus 30.84 33.12
EES01763 Sorghum vacuole 34.13 33.04
Zm00001d012249_P001 Maize vacuole 34.13 33.04
TraesCS3B01G558800.1 Wheat cytosol 20.66 33.01
HORVU5Hr1G058910.2 Barley endoplasmic reticulum, extracellular, vacuole 34.13 32.95
Zm00001d012375_P001 Maize vacuole 32.93 32.84
TraesCS3D01G256900.1 Wheat mitochondrion, plastid 35.03 32.77
TraesCS3A01G496700.1 Wheat golgi, vacuole 33.83 32.75
TraesCS3B01G559100.1 Wheat vacuole 33.83 32.75
GSMUA_Achr5P05340_001 Banana vacuole 35.03 32.59
EES01841 Sorghum vacuole 33.83 32.56
TraesCS3D01G504000.1 Wheat vacuole 33.53 32.46
Zm00001d012252_P001 Maize vacuole 33.53 32.46
OQU76676 Sorghum extracellular, golgi, vacuole 33.53 32.37
EES17427 Sorghum golgi, vacuole 33.23 32.36
TraesCS3B01G338500.1 Wheat extracellular, golgi, vacuole 33.23 32.36
Os08t0442200-01 Rice extracellular 33.83 32.29
HORVU3Hr1G109810.1 Barley golgi, vacuole 33.53 32.09
EER96671 Sorghum endoplasmic reticulum, golgi 33.53 32.0
TraesCS3A01G496900.1 Wheat vacuole 33.53 32.0
HORVU2Hr1G064060.1 Barley mitochondrion, vacuole 24.25 31.89
TraesCS7D01G075900.1 Wheat vacuole 32.93 31.88
TraesCS7D01G076300.1 Wheat vacuole 34.43 31.86
Zm00001d020308_P001 Maize cytosol, plastid, vacuole 15.27 31.68
TraesCS1A01G026500.1 Wheat vacuole 32.63 31.59
TraesCSU01G223800.1 Wheat vacuole 32.63 31.59
Os07t0543600-00 Rice golgi, vacuole 32.93 31.43
TraesCS7D01G076000.1 Wheat vacuole 32.04 31.38
TraesCS7B01G040900.1 Wheat golgi, vacuole 32.63 31.32
PGSC0003DMT400044685 Potato extracellular 25.15 31.23
Os08t0175000-00 Rice golgi, mitochondrion, vacuole 33.23 31.18
TraesCS5A01G188200.1 Wheat vacuole 33.83 31.13
TraesCS7D01G076600.1 Wheat cytosol 19.46 31.1
OQU87434 Sorghum golgi, vacuole 32.93 31.07
TraesCS5B01G195400.1 Wheat vacuole 33.83 31.04
TraesCS5D01G202800.1 Wheat golgi, vacuole 33.83 31.04
TraesCS7B01G040400.1 Wheat golgi, vacuole 32.34 31.03
TraesCS7D01G139900.1 Wheat vacuole 32.34 31.03
TraesCSU01G104000.1 Wheat golgi, vacuole 32.34 31.03
TraesCS7D01G140500.1 Wheat golgi, vacuole 32.04 31.01
EES05895 Sorghum golgi, vacuole 32.04 30.92
TraesCS2B01G281700.1 Wheat golgi, vacuole 31.74 30.81
HORVU5Hr1G078340.1 Barley golgi, vacuole 22.46 30.74
HORVU7Hr1G028580.1 Barley golgi, vacuole 32.34 30.68
EER90208 Sorghum vacuole 31.74 30.64
EES07680 Sorghum golgi, vacuole 31.74 30.64
OQU85880 Sorghum golgi, vacuole 31.74 30.64
TraesCS7A01G138300.1 Wheat cytosol 19.16 30.62
TraesCS7A01G138700.1 Wheat cytosol 19.16 30.62
Os06t0623700-01 Rice golgi, vacuole 32.04 30.57
EES05427 Sorghum vacuole 31.44 30.52
PGSC0003DMT400048627 Potato cytosol, golgi, mitochondrion, vacuole 31.14 30.5
TraesCS7D01G140000.1 Wheat golgi, vacuole 31.74 30.46
OQU79673 Sorghum vacuole 31.14 30.41
TraesCS7D01G140600.1 Wheat endoplasmic reticulum, plasma membrane 27.84 30.29
TraesCS5B01G330900.1 Wheat extracellular, vacuole 16.77 30.27
Zm00001d020307_P001 Maize endoplasmic reticulum, vacuole 18.56 30.1
HORVU5Hr1G091230.1 Barley golgi, mitochondrion, plastid, vacuole 32.04 30.06
EER96672 Sorghum vacuole 32.93 30.05
PGSC0003DMT400030927 Potato golgi, plasma membrane, vacuole 36.23 29.73
TraesCS5A01G188300.1 Wheat extracellular, plasma membrane, vacuole 33.53 29.71
PGSC0003DMT400015199 Potato vacuole 34.73 29.67
TraesCSU01G240600.1 Wheat cytosol 16.77 29.63
TraesCSU01G255900.1 Wheat cytosol 16.77 29.63
TraesCS7A01G138800.1 Wheat golgi, vacuole 26.95 29.51
TraesCS7D01G076500.1 Wheat cytosol 16.77 29.47
HORVU5Hr1G058940.2 Barley vacuole 32.34 29.43
HORVU5Hr1G009400.2 Barley cytosol, mitochondrion, plastid, vacuole 11.98 29.41
TraesCS1A01G437900.1 Wheat cytosol 16.17 29.03
HORVU3Hr1G074780.3 Barley cytosol, vacuole 31.74 28.34
PGSC0003DMT400007732 Potato vacuole 32.93 28.13
Os09t0374900-00 Rice cytosol, golgi, plastid, vacuole 31.44 27.49
EES17425 Sorghum extracellular 21.26 27.1
TraesCS2A01G260200.1 Wheat mitochondrion, vacuole 27.84 26.88
PGSC0003DMT400005990 Potato cytosol 22.75 26.3
HORVU4Hr1G016850.1 Barley cytosol 12.57 24.14
PGSC0003DMT400003995 Potato golgi, vacuole 23.95 21.39
Bra015944.1-P Field mustard vacuole 36.83 20.6
Zm00001d012373_P001 Maize vacuole 34.73 19.73
Protein Annotations
EnsemblPlants:PGSC0003DMT400063286EnsemblPlantsGene:PGSC0003DMG400024611Gene3D:2.120.10.30GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016844InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthasePANTHER:PTHR10426PANTHER:PTHR10426:SF57PFAM:PF03088PGSC:PGSC0003DMG400024611SEG:seg
SUPFAM:SSF63829TMHMM:TMhelixUniParc:UPI000295E13EUniProt:M1CAE1MapMan:50.4.3:
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400024611]
Coordinates
chr3:-:54508969..54510252
Molecular Weight (calculated)
36445.6 Da
IEP (calculated)
4.989
GRAVY (calculated)
0.069
Length
334 amino acids
Sequence
(BLAST)
001: MEIVSITKTI FLILQILIIL NASPYIVHCA FSRLQLPLRT FGPDSAAFDT KGDGPYTGVG DGRVFKYQGP ITGFTEFAIT SPNRTKQICN GTNDPISQIS
101: CGRPYGVGFY NKTGDLYITD AYYGLLVVTP SGGLATPLVT SFEGRPFAFL DSLDIDQEEG IIYFVDAGAI FRTRFLIALS GDTTGRLFKY DIATKQVTLL
201: LDKLSGPAGV ALSKDKSYLL VSEAIGKRIT RFWLEGAKAN SSDVFTNIDG NPDNIKRTVS GDFWVAVVSV KIKLLIIPTL NSTGQRINQL GEVVETRDFT
301: AQYTSANGIT EVQEYNDKLY IGSLDQNFIG VDGV
Best Arabidopsis Sequence Match ( AT1G74020.1 )
(BLAST)
001: MTSFCSMISL LLLLSLSSAV FSDDASFQKL PVPETRSGPE AFAFDSTGKG FYTGVSGGKI LKYLPETGYV DFAQITESSN SSWCDGTIGT ALAGRCGRPA
101: GIAFNEKTGD LYVADAPLGL HVISPAGGLA TKITDSVDGK PFKFLDGLDV DPTTGVVYFT SFSSRFSPIQ VLIALGLKDA TGKLYKYDPS TKVVTVLMEG
201: LSGSAGCAVS SDGSFVLVSQ FTKSNIKRYW IKGPKAGSSE DFTNSVSNPD NIKRIGSTGN FWVASVVNKI IVPTNPSAVK VNSNGEVLQT IPLKDKFGDT
301: LLSEVNEFEG NLYIGTLTGP FAGILKLEKG SCPAT
Arabidopsis Description
SSL12Protein STRICTOSIDINE SYNTHASE-LIKE 12 [Source:UniProtKB/Swiss-Prot;Acc:P94111]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.