Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- vacuole 4
- extracellular 2
- endoplasmic reticulum 2
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g053130.2.1 | Tomato | extracellular | 99.02 | 97.34 |
| VIT_05s0102g00880.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 74.69 | 74.88 |
| KRH10120 | Soybean | endoplasmic reticulum | 70.52 | 70.0 |
| KRH23218 | Soybean | golgi, vacuole | 70.52 | 70.0 |
| Bra007457.1-P | Field mustard | golgi, vacuole | 70.76 | 69.73 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 69.04 | 69.73 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 68.8 | 69.48 |
| Bra014536.1-P | Field mustard | vacuole | 70.02 | 68.84 |
| AT3G59530.3 | Thale cress | golgi, vacuole | 68.06 | 68.73 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 67.57 | 68.07 |
| EER92507 | Sorghum | cytosol, golgi, mitochondrion, vacuole | 62.16 | 61.41 |
| TraesCS4B01G215300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 62.16 | 61.26 |
| TraesCS4D01G215800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 61.92 | 61.02 |
| TraesCS4A01G089000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 61.92 | 61.02 |
| Zm00001d047858_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, vacuole | 61.18 | 60.44 |
| HORVU4Hr1G061230.2 | Barley | peroxisome, vacuole | 62.41 | 59.35 |
| Os03t0263600-01 | Rice | cytosol, golgi, mitochondrion, vacuole | 61.92 | 59.02 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 49.14 | 52.08 |
| PGSC0003DMT400015199 | Potato | vacuole | 41.77 | 43.48 |
| PGSC0003DMT400007732 | Potato | vacuole | 41.03 | 42.71 |
| PGSC0003DMT400076777 | Potato | vacuole | 36.61 | 40.05 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 15.23 | 40.0 |
| PGSC0003DMT400044684 | Potato | vacuole | 33.66 | 39.14 |
| PGSC0003DMT400007661 | Potato | vacuole | 36.36 | 39.05 |
| PGSC0003DMT400044685 | Potato | extracellular | 25.06 | 37.92 |
| PGSC0003DMT400044531 | Potato | vacuole | 34.64 | 37.8 |
| PGSC0003DMT400063274 | Potato | vacuole | 29.98 | 36.31 |
| PGSC0003DMT400063286 | Potato | vacuole | 29.73 | 36.23 |
| PGSC0003DMT400048627 | Potato | cytosol, golgi, mitochondrion, vacuole | 29.98 | 35.78 |
| PGSC0003DMT400056839 | Potato | vacuole | 27.03 | 35.26 |
| PGSC0003DMT400063277 | Potato | vacuole | 28.75 | 35.24 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 20.64 | 30.32 |
| PGSC0003DMT400005990 | Potato | cytosol | 20.88 | 29.41 |
| PGSC0003DMT400003995 | Potato | golgi, vacuole | 26.04 | 28.34 |
Protein Annotations
| EntrezGene:102597874 | Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:IPR011042 | UniProt:M1AUZ2 |
| PFAM:PF03088 | EnsemblPlantsGene:PGSC0003DMG400011845 | PGSC:PGSC0003DMG400011845 | EnsemblPlants:PGSC0003DMT400030927 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF21 |
| SUPFAM:SSF63829 | SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | UniParc:UPI000295FFDE | RefSeq:XP_006352136.1 |
| SEG:seg | : | : | : | : | : |
Description
Strictosidine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400011845]
Coordinates
chr3:-:15058199..15059781
Molecular Weight (calculated)
46099.7 Da
IEP (calculated)
7.265
GRAVY (calculated)
-0.176
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKRIQLIRS QLVSQRPHLF LLSLAFAFLV ADPFGLSPVG DTDFNPVKND IAPYKQVMES WHGDKNNRLG LGNLEFVNEI YGPESLEFDI LGHGPYAGLA
101: DGRIVRWMGE DAGWETFALV TRNWSEKLCA KGKDSTTPKQ YRVEPECGRP LGLRFNKQTG DLYIADAYYG LLVVGPEGGV ATSLATHVEG NRILFANDLD
201: IHTNGSIFFT DTSKKYNRVN HFLIMLEGED SGRLLRYDIA TKSTHVVLDG LTFPNGVQLS KDQTFLLFTE TTNCRLMKYW IEGPKRGIVE IVANLPGFPD
301: NVRVNEKGQF WVAIDCCRTR AQEVLINNPW MRSIYFRLPI QMRYLARLMG MKMYTVISLF NENGEIIDVL QDKKGVVMKL VSEVREINGK LWIGTVAHNH
401: IATLPYP
101: DGRIVRWMGE DAGWETFALV TRNWSEKLCA KGKDSTTPKQ YRVEPECGRP LGLRFNKQTG DLYIADAYYG LLVVGPEGGV ATSLATHVEG NRILFANDLD
201: IHTNGSIFFT DTSKKYNRVN HFLIMLEGED SGRLLRYDIA TKSTHVVLDG LTFPNGVQLS KDQTFLLFTE TTNCRLMKYW IEGPKRGIVE IVANLPGFPD
301: NVRVNEKGQF WVAIDCCRTR AQEVLINNPW MRSIYFRLPI QMRYLARLMG MKMYTVISLF NENGEIIDVL QDKKGVVMKL VSEVREINGK LWIGTVAHNH
401: IATLPYP
001: MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ
Arabidopsis Description
SSL13Protein STRICTOSIDINE SYNTHASE-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B4]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.