Factsheet for PGSC0003DMT400044531

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044685	Potato	extracellular	55.76	77.32
PGSC0003DMT400044684	Potato	vacuole	68.63	73.14
PGSC0003DMT400076777	Potato	vacuole	69.71	69.89
PGSC0003DMT400007661	Potato	vacuole	67.83	66.75
KRH66809	Soybean	endoplasmic reticulum	61.13	61.46
KRG95135	Soybean	endoplasmic reticulum	60.86	61.19
PGSC0003DMT400015199	Potato	vacuole	47.19	45.01
PGSC0003DMT400063282	Potato	extracellular, vacuole	18.5	44.52
PGSC0003DMT400007732	Potato	vacuole	45.58	43.48
PGSC0003DMT400056839	Potato	vacuole	34.32	41.03
PGSC0003DMT400063286	Potato	vacuole	35.12	39.22
PGSC0003DMT400063277	Potato	vacuole	34.58	38.86
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.15	37.91
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	34.58	37.83
PGSC0003DMT400063274	Potato	vacuole	34.05	37.8
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	37.8	34.64
PGSC0003DMT400005990	Potato	cytosol	22.52	29.07
PGSC0003DMT400003995	Potato	golgi, vacuole	25.74	25.67

Protein Annotations

EntrezGene:102587059	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042	UniProt:M1BGB5
PFAM:PF03088	EnsemblPlantsGene:PGSC0003DMG402017288	PGSC:PGSC0003DMG402017288	EnsemblPlants:PGSC0003DMT400044531	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22
SUPFAM:SSF63829	SignalP:SignalP-TM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI000296158D
RefSeq:XP_006348986.1	SEG:seg	:	:	:	:

Description

Strictosidine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG402017288]

Coordinates

chr7:+:50799666..50801006

Molecular Weight (calculated)

41047.5 Da

IEP (calculated)

8.197

GRAVY (calculated)

-0.080

Length

373 amino acids

Sequence
(BLAST)

001: MNASNLLLIS ATTALAIISL VFAFDNENVL KPPHIPGSQN LLTKSEIIQF KGAVGPESIA FDPNGEGPYT GVADGRILKW KGSYWSDFAV TSSHRKNCTL
101: PFAPELEHIC GRPLGLRFDT KTGDLYIADA YFGVQVVGPK GGLATPLVQK FEGKPLVFTN DIDIDDHDDV IYFTETSTKY QRRQFFASLL SGDKTGMLMK
201: YVKSTQQTKI LIRGLAFANG VALSKDKSFV LVAETSTGRI FRYWLKGPYK GKHDTFAELP GFPDNIRMNP RGDFWVALHA KRSLFAQLSI SDLELGKALL
301: KLPITAQQLD NLLAGGQPHA TAIKLSEDGQ VLEVLEDVEG KTLRSISEVQ EKQGKLWFGS VLMPFLGVYG LQV

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.